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Pathways

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Pathway No. COGs
16S rRNA modification 16
23S rRNA modification 12
A/V-type ATP synthase 8
Aminoacyl-tRNA synthetases 26
Archaeal ribosomal proteins 33
Archaella 14
Arginine biosynthesis 12
Aromatic amino acid biosynthesis 23
Asparagine biosynthesis 2
Biotin biosynthesis 8
CRISPR-Cas system 46
Cobalamine/B12 biosynthesis 24
Cysteine biosynthesis 8
Entner-Doudoroff pathway 1
Fatty acid biosynthesis 15
Flp/Tad pili 12
FoF1-type ATP synthase 12
Folate biosynthesis 9
Gluconeogenesis 6
Glutamine biosynthesis 6
Glycine cleavage 5
Glycolysis 18
Heme biosynthesis 14
Histidine biosynthesis 11
Isoleucine, leucine, valine biosynthesis 11
Isoprenoid biosynthesis 18
Lipid A biosynthesis 9
Lipoate biosynthesis 3
Lysine biosynthesis 12
Menaquinone biosynthesis 12
Methionine biosynthesis 10
Molybdopterin biosynthesis 12
Mureine biosynthesis 11
NAD biosynthesis 9
NADH dehydrogenase 15
Na+-translocating Fd:NADH oxidoreductase 6
Na+-translocating NADH dehydrogenase 7
Non-phosphorylated Entner-Doudoroff pathway 11
Pantothenate/CoA biosynthesis 13
Pentose phosphate pathway 8
Phospholipid biosynthesis 8
Photosystem I 17
Photosystem II 26
Proline biosynthesis 4
Proline degradation 2
Purine biosynthesis 20
Purine salvage 5
Pyridoxal phosphate biosynthesis 8
Pyrimidine biosynthesis 10
Pyrimidine degradation 7
Pyrimidine salvage 11
Pyruvate oxidation 10
RNA polymerase 16
Riboflavin/FAD biosynthesis 12
Ribosome 30S subunit 21
Ribosome 50S subunit 33
Sec pathway 9
Serine biosynthesis 4
TCA cycle 16
TCA cycle, glyoxylate bypass 2
Thiamine biosynthesis 10
Threonine biosynthesis 3
Thymidylate biosynthesis 7
Translation factors 21
Type II secretion/Type IV pili 27
Type III secretion system 37
Type IV secretion system 18
Type IVB secretion/DNA transfer system 7
Type IX secretion/gliding motility system 17
Type V secretion system 4
Type VI secretion system 25
Type VII secretion system 11
Type VIII secretion system 4
Type X secretion system 6
Ubiquinone biosynthesis 9
tRNA modification 67