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Status
Public on Apr 21, 2003
Title
MP-DX-1
Sample type
RNA
Source name
Primary Acute Lymphoblastic Leukemia Cells
Organism
Homo sapiens
Extracted molecule
total RNA
Description
Sample Type: human total RNA Sample User: jmorris Description: ALL-pre patient study Comments: Experiment User: jmorris Algorithm: Statistical Corner+ Avg:523, Count:32 Corner- Avg:38268, Count:32 BF: Alpha1:0.04,Alpha2:0.06,Tau:0.015,Gamma1H:0.0025,Gamma1L:0.0025,Gamma2H:0.003,Gamma2L:0.003,Perturbation:1.1,TGT:500,NF:1.000000,SF:10.581564,SFGene:All Background:Avg:529.04,Stdev:29.11,Max:602.6,Min:483.5 Noise:Avg:16.79,Stdev:1.70,Max:23.5,Min:13.4 RawQ:16.87 Keywords = ALL
Submission date
Jan 03, 2003
Last update date
Mar 16, 2009
Contact name
William E Evans
E-mail(s)
william.evans@stjude.org
Phone
901-495-4995
Fax
901-495-6869
URL
http://www.stjude.org/leukemia/bio_evans.htm
Organization name
St.Jude Children's Research Hospital
Department
Pharmaceutical Sciences
Lab
Evans
Street address
332 N. Lauderdale St.
City
Memphis
State/province
TN
ZIP/Postal code
38105
Country
USA
Platform ID
GPL8300
Series (2)
GSE255
MP-1 pair
GSE412
Treatment-specific changes in gene expression discriminate in vivo drug response in human leukemia cells
Data table header descriptions
ID_REF
As defined by Affymetrix, these are the probe set identifiers, each of which is unique to a specific probe set defining a specific region of a single gene or set.
VALUE
This is the final calculated meauremeent for each probe set identifer that has been made comparable, through scaling or normalization, accross all samples and rows.
Detection_p_value
Data table
ID_REF
VALUE
Detection_p_value
1000_at
762.7
0.138765
1001_at
97.8
0.882840
1002_f_at
252.5
0.602006
1003_s_at
91.4
0.824011
1004_at
60.0
0.960635
1005_at
4086.8
0.000266
1006_at
23.4
0.933135
1007_s_at
801.4
0.043968
1008_f_at
3383.6
0.000322
1009_at
7163.6
0.000266
100_g_at
704.5
0.358690
1010_at
83.6
0.939581
1011_s_at
677.6
0.009985
1012_at
117.9
0.910595
1013_at
256.0
0.339558
1014_at
188.1
0.715253
1015_s_at
141.3
0.951005
1016_s_at
31.6
0.945530
1017_at
456.0
0.048995
1018_at
406.4
0.500000
Total number of rows: 12625 Table truncated, full table size 296 Kbytes .Supplementary data files not provided