GEO help: Mouse over screen elements for information.
Status
Public on Apr 21, 2003
Title
HDMTX-DX-15
Sample type
RNA
Source name
Primary Acute Lymphoblastic Leukemia Cells
Organism
Homo sapiens
Extracted molecule
total RNA
Description
Operator Name: Sample Type: Sample Description: Comments: Reagents: Reagent Lot: Algorithm: Statistical Corner+ Avg:378, Count:32 Corner- Avg:32046, Count:32 BF: Alpha1:0.04,Alpha2:0.06,Tau:0.015,Gamma1H:0.0025,Gamma1L:0.0025,Gamma2H:0.003,Gamma2L:0.003,Perturbation:1.1,TGT:500,NF:1.000000,SF:8.905122,SFGene:All Background:Avg:591.35,Stdev:17.35,Max:645.6,Min:568.9 Noise:Avg:13.72,Stdev:0.52,Max:15.2,Min:12.2 RawQ:17.88 Keywords = ALL
Submission date
Jan 03, 2003
Last update date
Mar 16, 2009
Contact name
William E Evans
E-mail(s)
william.evans@stjude.org
Phone
901-495-4995
Fax
901-495-6869
URL
http://www.stjude.org/leukemia/bio_evans.htm
Organization name
St.Jude Children's Research Hospital
Department
Pharmaceutical Sciences
Lab
Evans
Street address
332 N. Lauderdale St.
City
Memphis
State/province
TN
ZIP/Postal code
38105
Country
USA
Platform ID
GPL8300
Series (2)
GSE223
HDMTX-15 pair
GSE412
Treatment-specific changes in gene expression discriminate in vivo drug response in human leukemia cells
Data table header descriptions
ID_REF
As defined by Affymetrix, these are the probe set identifiers, each of which is unique to a specific probe set defining a specific region of a single gene or set.
VALUE
This is the final calculated meauremeent for each probe set identifer that has been made comparable, through scaling or normalization, accross all samples and rows.
Detection_p_value
Data table
ID_REF
VALUE
Detection_p_value
1000_at
519.1
0.302547
1001_at
274.9
0.218983
1002_f_at
94.8
0.882840
1003_s_at
92.4
0.732537
1004_at
82.0
0.837065
1005_at
4620.1
0.000562
1006_at
143.1
0.715253
1007_s_at
925.4
0.127645
1008_f_at
3777.7
0.000266
1009_at
2554.1
0.000468
100_g_at
318.6
0.500000
1010_at
119.1
0.697453
1011_s_at
805.1
0.005643
1012_at
47.0
0.926170
1013_at
51.7
0.882840
1014_at
964.5
0.035163
1015_s_at
60.6
0.995820
1016_s_at
41.5
0.951005
1017_at
373.9
0.250724
1018_at
421.5
0.458816
Total number of rows: 12625 Table truncated, full table size 297 Kbytes .Supplementary data files not provided