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Sample GSM3481 Query DataSets for GSM3481
Status Public on Apr 21, 2003
Title HDMTX-DX-15
Sample type RNA
 
Source name Primary Acute Lymphoblastic Leukemia Cells
Organism Homo sapiens
Extracted molecule total RNA
 
Description Operator Name:
Sample Type:
Sample Description:
Comments:
Reagents:
Reagent Lot:
Algorithm: Statistical
Corner+ Avg:378, Count:32
Corner- Avg:32046, Count:32
BF: Alpha1:0.04,Alpha2:0.06,Tau:0.015,Gamma1H:0.0025,Gamma1L:0.0025,Gamma2H:0.003,Gamma2L:0.003,Perturbation:1.1,TGT:500,NF:1.000000,SF:8.905122,SFGene:All
Background:Avg:591.35,Stdev:17.35,Max:645.6,Min:568.9
Noise:Avg:13.72,Stdev:0.52,Max:15.2,Min:12.2
RawQ:17.88
Keywords = ALL
 
Submission date Jan 03, 2003
Last update date Mar 16, 2009
Contact name William E Evans
E-mail(s) william.evans@stjude.org
Phone 901-495-4995
Fax 901-495-6869
URL http://www.stjude.org/leukemia/bio_evans.htm
Organization name St.Jude Children's Research Hospital
Department Pharmaceutical Sciences
Lab Evans
Street address 332 N. Lauderdale St.
City Memphis
State/province TN
ZIP/Postal code 38105
Country USA
 
Platform ID GPL8300
Series (2)
GSE223 HDMTX-15 pair
GSE412 Treatment-specific changes in gene expression discriminate in vivo drug response in human leukemia cells

Data table header descriptions
ID_REF As defined by Affymetrix, these are the probe set identifiers, each of which is unique to a specific probe set defining a specific region of a single gene or set.
VALUE This is the final calculated meauremeent for each probe set identifer that has been made comparable, through scaling or normalization, accross all samples and rows.
Detection_p_value

Data table
ID_REF VALUE Detection_p_value
1000_at 519.1 0.302547
1001_at 274.9 0.218983
1002_f_at 94.8 0.882840
1003_s_at 92.4 0.732537
1004_at 82.0 0.837065
1005_at 4620.1 0.000562
1006_at 143.1 0.715253
1007_s_at 925.4 0.127645
1008_f_at 3777.7 0.000266
1009_at 2554.1 0.000468
100_g_at 318.6 0.500000
1010_at 119.1 0.697453
1011_s_at 805.1 0.005643
1012_at 47.0 0.926170
1013_at 51.7 0.882840
1014_at 964.5 0.035163
1015_s_at 60.6 0.995820
1016_s_at 41.5 0.951005
1017_at 373.9 0.250724
1018_at 421.5 0.458816

Total number of rows: 12625

Table truncated, full table size 297 Kbytes.




Supplementary data files not provided

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