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Status
Public on Apr 21, 2003
Title
HDMTX-DX-4
Sample type
RNA
Source name
Primary Acute Lymphoblastic Leukemia Cells
Organism
Homo sapiens
Extracted molecule
total RNA
Description
Sample Type: human total RNA Sample User: dpatel Experiment User: dpatel Algorithm: Statistical Corner+ Avg:354, Count:32 Corner- Avg:32797, Count:32 BF: Alpha1:0.04,Alpha2:0.06,Tau:0.015,Gamma1H:0.0025,Gamma1L:0.0025,Gamma2H:0.003,Gamma2L:0.003,Perturbation:1.1,TGT:500,NF:1.000000,SF:6.210512,SFGene:All Background:Avg:294.21,Stdev:4.75,Max:307.6,Min:284.7 Noise:Avg:7.86,Stdev:0.23,Max:8.5,Min:7.2 RawQ:12.32 Keywords = ALL
Submission date
Jan 03, 2003
Last update date
Mar 16, 2009
Contact name
William E Evans
E-mail(s)
william.evans@stjude.org
Phone
901-495-4995
Fax
901-495-6869
URL
http://www.stjude.org/leukemia/bio_evans.htm
Organization name
St.Jude Children's Research Hospital
Department
Pharmaceutical Sciences
Lab
Evans
Street address
332 N. Lauderdale St.
City
Memphis
State/province
TN
ZIP/Postal code
38105
Country
USA
Platform ID
GPL8300
Series (2)
GSE233
HDMTX-4 pair
GSE412
Treatment-specific changes in gene expression discriminate in vivo drug response in human leukemia cells
Data table header descriptions
ID_REF
As defined by Affymetrix, these are the probe set identifiers, each of which is unique to a specific probe set defining a specific region of a single gene or set.
VALUE
This is the final calculated meauremeent for each probe set identifer that has been made comparable, through scaling or normalization, accross all samples and rows.
Detection_p_value
Data table
ID_REF
VALUE
Detection_p_value
1000_at
681.6
0.039365
1001_at
391.3
0.043968
1002_f_at
89.9
0.697453
1003_s_at
42.8
0.810313
1004_at
343.5
0.150527
1005_at
3422.8
0.000219
1006_at
14.8
0.660442
1007_s_at
549.8
0.039365
1008_f_at
2806.4
0.000805
1009_at
3385.8
0.000322
100_g_at
204.0
0.500000
1010_at
27.8
0.918663
1011_s_at
720.3
0.000805
1012_at
172.2
0.048995
1013_at
95.2
0.541184
1014_at
1025.7
0.001354
1015_s_at
37.7
0.951005
1016_s_at
12.5
0.964837
1017_at
319.3
0.031336
1018_at
19.0
0.715253
Total number of rows: 12600 Table truncated, full table size 295 Kbytes .Supplementary data files not provided