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Sample GSM3467 Query DataSets for GSM3467
Status Public on Apr 21, 2003
Title HDMTX-DX-4
Sample type RNA
 
Source name Primary Acute Lymphoblastic Leukemia Cells
Organism Homo sapiens
Extracted molecule total RNA
 
Description Sample Type: human total RNA
Sample User: dpatel
Experiment User: dpatel
Algorithm: Statistical
Corner+ Avg:354, Count:32
Corner- Avg:32797, Count:32
BF: Alpha1:0.04,Alpha2:0.06,Tau:0.015,Gamma1H:0.0025,Gamma1L:0.0025,Gamma2H:0.003,Gamma2L:0.003,Perturbation:1.1,TGT:500,NF:1.000000,SF:6.210512,SFGene:All
Background:Avg:294.21,Stdev:4.75,Max:307.6,Min:284.7
Noise:Avg:7.86,Stdev:0.23,Max:8.5,Min:7.2
RawQ:12.32
Keywords = ALL
 
Submission date Jan 03, 2003
Last update date Mar 16, 2009
Contact name William E Evans
E-mail(s) william.evans@stjude.org
Phone 901-495-4995
Fax 901-495-6869
URL http://www.stjude.org/leukemia/bio_evans.htm
Organization name St.Jude Children's Research Hospital
Department Pharmaceutical Sciences
Lab Evans
Street address 332 N. Lauderdale St.
City Memphis
State/province TN
ZIP/Postal code 38105
Country USA
 
Platform ID GPL8300
Series (2)
GSE233 HDMTX-4 pair
GSE412 Treatment-specific changes in gene expression discriminate in vivo drug response in human leukemia cells

Data table header descriptions
ID_REF As defined by Affymetrix, these are the probe set identifiers, each of which is unique to a specific probe set defining a specific region of a single gene or set.
VALUE This is the final calculated meauremeent for each probe set identifer that has been made comparable, through scaling or normalization, accross all samples and rows.
Detection_p_value

Data table
ID_REF VALUE Detection_p_value
1000_at 681.6 0.039365
1001_at 391.3 0.043968
1002_f_at 89.9 0.697453
1003_s_at 42.8 0.810313
1004_at 343.5 0.150527
1005_at 3422.8 0.000219
1006_at 14.8 0.660442
1007_s_at 549.8 0.039365
1008_f_at 2806.4 0.000805
1009_at 3385.8 0.000322
100_g_at 204.0 0.500000
1010_at 27.8 0.918663
1011_s_at 720.3 0.000805
1012_at 172.2 0.048995
1013_at 95.2 0.541184
1014_at 1025.7 0.001354
1015_s_at 37.7 0.951005
1016_s_at 12.5 0.964837
1017_at 319.3 0.031336
1018_at 19.0 0.715253

Total number of rows: 12600

Table truncated, full table size 295 Kbytes.




Supplementary data files not provided

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