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Sample GSM3443 Query DataSets for GSM3443
Status Public on Apr 21, 2003
Title HDMTX-6
Sample type RNA
 
Source name Primary Acute Lymphoblastic Leukemia Cells
Organism Homo sapiens
Extracted molecule total RNA
 
Description Sample User: jmorris
Description: ALL-post patient study
Comments:
Experiment User: jmorris
Algorithm: Statistical
Corner+ Avg:334, Count:32
Corner- Avg:38033, Count:32
BF: Alpha1:0.04,Alpha2:0.06,Tau:0.015,Gamma1H:0.0025,Gamma1L:0.0025,Gamma2H:0.003,Gamma2L:0.003,Perturbation:1.1,TGT:500,NF:1.000000,SF:4.198062,SFGene:All
Background:Avg:363.07,Stdev:3.48,Max:373.7,Min:355.4
Noise:Avg:7.99,Stdev:0.29,Max:8.7,Min:7.1
RawQ:11.86
Keywords = ALL
 
Submission date Jan 02, 2003
Last update date Mar 16, 2009
Contact name William E Evans
E-mail(s) william.evans@stjude.org
Phone 901-495-4995
Fax 901-495-6869
URL http://www.stjude.org/leukemia/bio_evans.htm
Organization name St.Jude Children's Research Hospital
Department Pharmaceutical Sciences
Lab Evans
Street address 332 N. Lauderdale St.
City Memphis
State/province TN
ZIP/Postal code 38105
Country USA
 
Platform ID GPL8300
Series (3)
GSE235 HDMTX-6 pair
GSE268 HDMTX
GSE412 Treatment-specific changes in gene expression discriminate in vivo drug response in human leukemia cells

Data table header descriptions
ID_REF As defined by Affymetrix, these are the probe set identifiers, each of which is unique to a specific probe set defining a specific region of a single gene or set.
VALUE This is the final calculated meauremeent for each probe set identifer that has been made comparable, through scaling or normalization, accross all samples and rows.
Detection_p_value

Data table
ID_REF VALUE Detection_p_value
1000_at 1359.4 0.003067
1001_at 116.1 0.320830
1002_f_at 26.6 0.679170
1003_s_at 50.8 0.660442
1004_at 268.3 0.189687
1005_at 2185.8 0.000266
1006_at 20.6 0.732537
1007_s_at 552.4 0.003585
1008_f_at 908.0 0.001354
1009_at 3388.5 0.000219
100_g_at 513.5 0.073830
1010_at 33.6 0.715253
1011_s_at 845.2 0.000266
1012_at 104.9 0.098054
1013_at 3.7 0.964837
1014_at 1037.8 0.000673
1015_s_at 193.5 0.438361
1016_s_at 56.2 0.749276
1017_at 113.0 0.339558
1018_at 21.0 0.918663

Total number of rows: 12625

Table truncated, full table size 295 Kbytes.




Supplementary data files not provided

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