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Sample GSM3440 Query DataSets for GSM3440
Status Public on Apr 21, 2003
Title HDMTX-9
Sample type RNA
 
Source name Primary Acute Lymphoblastic Leukemia Cells
Organism Homo sapiens
Extracted molecule total RNA
 
Description Sample User: jmorris
Description: ALL-post patient study
Comments:
Experiment User: jmorris
Algorithm: Statistical
Corner+ Avg:494, Count:32
Corner- Avg:27549, Count:32
BF: Alpha1:0.04,Alpha2:0.06,Tau:0.015,Gamma1H:0.0025,Gamma1L:0.0025,Gamma2H:0.003,Gamma2L:0.003,Perturbation:1.1,TGT:500,NF:1.000000,SF:7.694901,SFGene:All
Background:Avg:402.38,Stdev:3.13,Max:414.0,Min:396.1
Noise:Avg:8.80,Stdev:0.24,Max:9.4,Min:8.1
RawQ:12.70
Keywords = ALL
 
Submission date Jan 02, 2003
Last update date Mar 16, 2009
Contact name William E Evans
E-mail(s) william.evans@stjude.org
Phone 901-495-4995
Fax 901-495-6869
URL http://www.stjude.org/leukemia/bio_evans.htm
Organization name St.Jude Children's Research Hospital
Department Pharmaceutical Sciences
Lab Evans
Street address 332 N. Lauderdale St.
City Memphis
State/province TN
ZIP/Postal code 38105
Country USA
 
Platform ID GPL8300
Series (3)
GSE238 HDMTX-9 pair
GSE268 HDMTX
GSE412 Treatment-specific changes in gene expression discriminate in vivo drug response in human leukemia cells

Data table header descriptions
ID_REF As defined by Affymetrix, these are the probe set identifiers, each of which is unique to a specific probe set defining a specific region of a single gene or set.
VALUE This is the final calculated meauremeent for each probe set identifer that has been made comparable, through scaling or normalization, accross all samples and rows.
Detection_p_value

Data table
ID_REF VALUE Detection_p_value
1000_at 740.8 0.081337
1001_at 47.6 0.602006
1002_f_at 58.4 0.621816
1003_s_at 202.5 0.679170
1004_at 117.4 0.602006
1005_at 436.5 0.358690
1006_at 86.6 0.660442
1007_s_at 473.8 0.267463
1008_f_at 2406.1 0.001602
1009_at 7099.1 0.000219
100_g_at 445.3 0.162935
1010_at 57.1 0.849473
1011_s_at 1036.0 0.000468
1012_at 135.0 0.479380
1013_at 21.5 0.901946
1014_at 1585.8 0.004180
1015_s_at 119.2 0.892699
1016_s_at 24.3 0.994357
1017_at 148.0 0.320830
1018_at 75.3 0.849473

Total number of rows: 12625

Table truncated, full table size 296 Kbytes.




Supplementary data files not provided

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