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Sample GSM3439 Query DataSets for GSM3439
Status Public on Apr 21, 2003
Title MP-1
Sample type RNA
 
Source name Primary Acute Lymphoblastic Leukemia Cells
Organism Homo sapiens
Extracted molecule total RNA
 
Description Sample User: jmorris
Description: ALL-post patient study
Comments:
Experiment User: dpatel
Algorithm: Statistical
Corner+ Avg:306, Count:32
Corner- Avg:34655, Count:32
BF: Alpha1:0.04,Alpha2:0.06,Tau:0.015,Gamma1H:0.0025,Gamma1L:0.0025,Gamma2H:0.003,Gamma2L:0.003,Perturbation:1.1,TGT:500,NF:1.000000,SF:6.310359,SFGene:All
Background:Avg:579.31,Stdev:20.01,Max:616.0,Min:535.1
Noise:Avg:14.79,Stdev:0.63,Max:16.8,Min:12.9
RawQ:17.41
Keywords = ALL
 
Submission date Jan 02, 2003
Last update date Mar 16, 2009
Contact name William E Evans
E-mail(s) william.evans@stjude.org
Phone 901-495-4995
Fax 901-495-6869
URL http://www.stjude.org/leukemia/bio_evans.htm
Organization name St.Jude Children's Research Hospital
Department Pharmaceutical Sciences
Lab Evans
Street address 332 N. Lauderdale St.
City Memphis
State/province TN
ZIP/Postal code 38105
Country USA
 
Platform ID GPL8300
Series (3)
GSE255 MP-1 pair
GSE270 MP
GSE412 Treatment-specific changes in gene expression discriminate in vivo drug response in human leukemia cells

Data table header descriptions
ID_REF As defined by Affymetrix, these are the probe set identifiers, each of which is unique to a specific probe set defining a specific region of a single gene or set.
VALUE This is the final calculated meauremeent for each probe set identifer that has been made comparable, through scaling or normalization, accross all samples and rows.
Detection_p_value

Data table
ID_REF VALUE Detection_p_value
1000_at 770.8 0.054470
1001_at 257.2 0.500000
1002_f_at 59.1 0.781017
1003_s_at 129.0 0.479380
1004_at 181.0 0.697453
1005_at 386.6 0.397994
1006_at 112.7 0.660442
1007_s_at 3419.9 0.000219
1008_f_at 3022.5 0.000805
1009_at 2868.2 0.000322
100_g_at 382.3 0.284747
1010_at 49.3 0.765443
1011_s_at 1010.6 0.000322
1012_at 215.0 0.267463
1013_at 144.4 0.561639
1014_at 1093.1 0.001354
1015_s_at 75.2 0.980696
1016_s_at 48.8 0.892699
1017_at 17.0 0.975289
1018_at 109.4 0.765443

Total number of rows: 12625

Table truncated, full table size 296 Kbytes.




Supplementary data files not provided

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