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Sample GSM3427 Query DataSets for GSM3427
Status Public on Apr 21, 2003
Title HDMTX_MP-1
Sample type RNA
 
Source name Primary Acute Lymphoblastic Leukemia Cells
Organism Homo sapiens
Extracted molecule total RNA
 
Description Sample User: jmorris
Description: ALL-post patient study
Comments:
Experiment User: jmorris
Algorithm: Statistical
Corner+ Avg:595, Count:32
Corner- Avg:33202, Count:32
BF: Alpha1:0.04,Alpha2:0.06,Tau:0.015,Gamma1H:0.0025,Gamma1L:0.0025,Gamma2H:0.003,Gamma2L:0.003,Perturbation:1.1,TGT:500,NF:1.000000,SF:5.146851,SFGene:All
Background:Avg:632.03,Stdev:10.66,Max:661.0,Min:610.6
Noise:Avg:13.36,Stdev:0.48,Max:14.8,Min:11.9
RawQ:16.73
Keywords = ALL
 
Submission date Jan 02, 2003
Last update date Mar 16, 2009
Contact name William E Evans
E-mail(s) william.evans@stjude.org
Phone 901-495-4995
Fax 901-495-6869
URL http://www.stjude.org/leukemia/bio_evans.htm
Organization name St.Jude Children's Research Hospital
Department Pharmaceutical Sciences
Lab Evans
Street address 332 N. Lauderdale St.
City Memphis
State/province TN
ZIP/Postal code 38105
Country USA
 
Platform ID GPL8300
Series (3)
GSE207 HDMTX_MP-1 pair
GSE269 HDMTX_MP
GSE412 Treatment-specific changes in gene expression discriminate in vivo drug response in human leukemia cells

Data table header descriptions
ID_REF As defined by Affymetrix, these are the probe set identifiers, each of which is unique to a specific probe set defining a specific region of a single gene or set.
VALUE This is the final calculated meauremeent for each probe set identifer that has been made comparable, through scaling or normalization, accross all samples and rows.
Detection_p_value

Data table
ID_REF VALUE Detection_p_value
1000_at 872.5 0.039365
1001_at 268.6 0.138765
1002_f_at 168.3 0.621816
1003_s_at 252.5 0.621816
1004_at 115.1 0.749276
1005_at 484.5 0.302547
1006_at 59.5 0.715253
1007_s_at 163.6 0.715253
1008_f_at 1394.7 0.000959
1009_at 7221.7 0.000266
100_g_at 582.4 0.066865
1010_at 41.4 0.781017
1011_s_at 345.2 0.002228
1012_at 93.9 0.458816
1013_at 7.6 0.991311
1014_at 1378.3 0.002617
1015_s_at 61.2 0.993468
1016_s_at 22.3 0.945530
1017_at 35.7 0.765443
1018_at 264.8 0.339558

Total number of rows: 12625

Table truncated, full table size 296 Kbytes.




Supplementary data files not provided

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