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Status
Public on Apr 21, 2003
Title
HDMTX_MP-1
Sample type
RNA
Source name
Primary Acute Lymphoblastic Leukemia Cells
Organism
Homo sapiens
Extracted molecule
total RNA
Description
Sample User: jmorris Description: ALL-post patient study Comments: Experiment User: jmorris Algorithm: Statistical Corner+ Avg:595, Count:32 Corner- Avg:33202, Count:32 BF: Alpha1:0.04,Alpha2:0.06,Tau:0.015,Gamma1H:0.0025,Gamma1L:0.0025,Gamma2H:0.003,Gamma2L:0.003,Perturbation:1.1,TGT:500,NF:1.000000,SF:5.146851,SFGene:All Background:Avg:632.03,Stdev:10.66,Max:661.0,Min:610.6 Noise:Avg:13.36,Stdev:0.48,Max:14.8,Min:11.9 RawQ:16.73 Keywords = ALL
Submission date
Jan 02, 2003
Last update date
Mar 16, 2009
Contact name
William E Evans
E-mail(s)
william.evans@stjude.org
Phone
901-495-4995
Fax
901-495-6869
URL
http://www.stjude.org/leukemia/bio_evans.htm
Organization name
St.Jude Children's Research Hospital
Department
Pharmaceutical Sciences
Lab
Evans
Street address
332 N. Lauderdale St.
City
Memphis
State/province
TN
ZIP/Postal code
38105
Country
USA
Platform ID
GPL8300
Series (3)
GSE207
HDMTX_MP-1 pair
GSE269
HDMTX_MP
GSE412
Treatment-specific changes in gene expression discriminate in vivo drug response in human leukemia cells
Data table header descriptions
ID_REF
As defined by Affymetrix, these are the probe set identifiers, each of which is unique to a specific probe set defining a specific region of a single gene or set.
VALUE
This is the final calculated meauremeent for each probe set identifer that has been made comparable, through scaling or normalization, accross all samples and rows.
Detection_p_value
Data table
ID_REF
VALUE
Detection_p_value
1000_at
872.5
0.039365
1001_at
268.6
0.138765
1002_f_at
168.3
0.621816
1003_s_at
252.5
0.621816
1004_at
115.1
0.749276
1005_at
484.5
0.302547
1006_at
59.5
0.715253
1007_s_at
163.6
0.715253
1008_f_at
1394.7
0.000959
1009_at
7221.7
0.000266
100_g_at
582.4
0.066865
1010_at
41.4
0.781017
1011_s_at
345.2
0.002228
1012_at
93.9
0.458816
1013_at
7.6
0.991311
1014_at
1378.3
0.002617
1015_s_at
61.2
0.993468
1016_s_at
22.3
0.945530
1017_at
35.7
0.765443
1018_at
264.8
0.339558
Total number of rows: 12625 Table truncated, full table size 296 Kbytes .Supplementary data files not provided