GEO help: Mouse over screen elements for information.
Status
Public on Apr 21, 2003
Title
HDMTX-12
Sample type
RNA
Source name
Primary Acute Lymphoblastic Leukemia Cells
Organism
Homo sapiens
Extracted molecule
total RNA
Description
Sample User: jmorris Description: ALL-post patient study Comments: Experiment User: dpatel Algorithm: Statistical Corner+ Avg:456, Count:32 Corner- Avg:31434, Count:32 BF: Alpha1:0.04,Alpha2:0.06,Tau:0.015,Gamma1H:0.0025,Gamma1L:0.0025,Gamma2H:0.003,Gamma2L:0.003,Perturbation:1.1,TGT:500,NF:1.000000,SF:5.482294,SFGene:All Background:Avg:672.81,Stdev:8.83,Max:695.1,Min:653.5 Noise:Avg:14.89,Stdev:0.47,Max:16.2,Min:13.8 RawQ:17.21 Keywords = ALL
Submission date
Jan 02, 2003
Last update date
Mar 16, 2009
Contact name
William E Evans
E-mail(s)
william.evans@stjude.org
Phone
901-495-4995
Fax
901-495-6869
URL
http://www.stjude.org/leukemia/bio_evans.htm
Organization name
St.Jude Children's Research Hospital
Department
Pharmaceutical Sciences
Lab
Evans
Street address
332 N. Lauderdale St.
City
Memphis
State/province
TN
ZIP/Postal code
38105
Country
USA
Platform ID
GPL8300
Series (3)
GSE220
HDMTX-12 pair
GSE268
HDMTX
GSE412
Treatment-specific changes in gene expression discriminate in vivo drug response in human leukemia cells
Data table header descriptions
ID_REF
As defined by Affymetrix, these are the probe set identifiers, each of which is unique to a specific probe set defining a specific region of a single gene or set.
VALUE
This is the final calculated meauremeent for each probe set identifer that has been made comparable, through scaling or normalization, accross all samples and rows.
Detection_p_value
Data table
ID_REF
VALUE
Detection_p_value
1000_at
980.2
0.017001
1001_at
724.4
0.004863
1002_f_at
43.5
0.861235
1003_s_at
93.0
0.715253
1004_at
161.4
0.479380
1005_at
261.8
0.397994
1006_at
100.2
0.837065
1007_s_at
1189.8
0.002228
1008_f_at
3078.3
0.001354
1009_at
3706.2
0.000266
100_g_at
229.6
0.479380
1010_at
46.7
0.972140
1011_s_at
467.8
0.000959
1012_at
243.1
0.267463
1013_at
214.8
0.520620
1014_at
1039.7
0.019304
1015_s_at
114.4
0.960635
1016_s_at
59.2
0.975289
1017_at
131.6
0.520620
1018_at
268.5
0.397994
Total number of rows: 12625 Table truncated, full table size 296 Kbytes .Supplementary data files not provided