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Status
Public on Apr 21, 2003
Title
LDMTX_MP-1
Sample type
RNA
Source name
Primary Acute Lymphoblastic Leukemia Cells
Organism
Homo sapiens
Extracted molecule
total RNA
Description
Sample User: jmorris Description: ALL-post patient study Comments: Experiment User: jmorris Algorithm: Statistical Corner+ Avg:340, Count:32 Corner- Avg:29838, Count:32 BF: Alpha1:0.04,Alpha2:0.06,Tau:0.015,Gamma1H:0.0025,Gamma1L:0.0025,Gamma2H:0.003,Gamma2L:0.003,Perturbation:1.1,TGT:500,NF:1.000000,SF:5.649508,SFGene:All Background:Avg:466.28,Stdev:4.94,Max:481.3,Min:455.3 Noise:Avg:9.96,Stdev:0.21,Max:10.7,Min:9.3 RawQ:13.78 Keywords = ALL
Submission date
Jan 02, 2003
Last update date
Mar 16, 2009
Contact name
William E Evans
E-mail(s)
william.evans@stjude.org
Phone
901-495-4995
Fax
901-495-6869
URL
http://www.stjude.org/leukemia/bio_evans.htm
Organization name
St.Jude Children's Research Hospital
Department
Pharmaceutical Sciences
Lab
Evans
Street address
332 N. Lauderdale St.
City
Memphis
State/province
TN
ZIP/Postal code
38105
Country
USA
Platform ID
GPL8300
Series (3)
GSE239
LDMTX_MP-1 pair
GSE267
LDMTX_MP
GSE412
Treatment-specific changes in gene expression discriminate in vivo drug response in human leukemia cells
Data table header descriptions
ID_REF
As defined by Affymetrix, these are the probe set identifiers, each of which is unique to a specific probe set defining a specific region of a single gene or set.
VALUE
This is the final calculated meauremeent for each probe set identifer that has been made comparable, through scaling or normalization, accross all samples and rows.
Detection_p_value
Data table
ID_REF
VALUE
Detection_p_value
1000_at
757.7
0.039365
1001_at
319.1
0.098054
1002_f_at
44.3
0.781017
1003_s_at
115.1
0.660442
1004_at
75.1
0.765443
1005_at
690.3
0.089405
1006_at
35.4
0.641310
1007_s_at
1486.7
0.011447
1008_f_at
4454.2
0.004180
1009_at
3463.5
0.000562
100_g_at
873.8
0.089405
1010_at
13.7
0.849473
1011_s_at
609.5
0.002617
1012_at
114.1
0.397994
1013_at
64.8
0.810313
1014_at
1362.7
0.031336
1015_s_at
68.9
0.926170
1016_s_at
13.8
0.882840
1017_at
67.8
0.861235
1018_at
93.1
0.765443
Total number of rows: 12625 Table truncated, full table size 296 Kbytes .Supplementary data files not provided