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Status
Public on Apr 21, 2003
Title
HDMTX-13
Sample type
RNA
Source name
Primary Acute Lymphoblastic Leukemia Cells
Organism
Homo sapiens
Extracted molecule
total RNA
Description
Sample User: jmorris Description: ALL-post patient study Comments: Experiment User: dpatel Algorithm: Statistical Corner+ Avg:326, Count:32 Corner- Avg:31904, Count:32 BF: Alpha1:0.04,Alpha2:0.06,Tau:0.015,Gamma1H:0.0025,Gamma1L:0.0025,Gamma2H:0.003,Gamma2L:0.003,Perturbation:1.1,TGT:500,NF:1.000000,SF:7.404772,SFGene:All Background:Avg:585.04,Stdev:47.68,Max:671.6,Min:469.8 Noise:Avg:12.17,Stdev:0.93,Max:15.1,Min:10.0 RawQ:15.78 Keywords = ALL
Submission date
Jan 02, 2003
Last update date
Mar 16, 2009
Contact name
William E Evans
E-mail(s)
william.evans@stjude.org
Phone
901-495-4995
Fax
901-495-6869
URL
http://www.stjude.org/leukemia/bio_evans.htm
Organization name
St.Jude Children's Research Hospital
Department
Pharmaceutical Sciences
Lab
Evans
Street address
332 N. Lauderdale St.
City
Memphis
State/province
TN
ZIP/Postal code
38105
Country
USA
Platform ID
GPL8300
Series (3)
GSE221
HDMTX-13 pair
GSE268
HDMTX
GSE412
Treatment-specific changes in gene expression discriminate in vivo drug response in human leukemia cells
Data table header descriptions
ID_REF
As defined by Affymetrix, these are the probe set identifiers, each of which is unique to a specific probe set defining a specific region of a single gene or set.
VALUE
This is the final calculated meauremeent for each probe set identifer that has been made comparable, through scaling or normalization, accross all samples and rows.
Detection_p_value
Data table
ID_REF
VALUE
Detection_p_value
1000_at
1154.0
0.039365
1001_at
211.9
0.358690
1002_f_at
36.0
0.945530
1003_s_at
85.5
0.621816
1004_at
53.3
0.901946
1005_at
4389.7
0.000266
1006_at
24.5
0.892699
1007_s_at
664.8
0.008689
1008_f_at
4275.5
0.000805
1009_at
3274.6
0.000219
100_g_at
369.5
0.339558
1010_at
39.1
0.810313
1011_s_at
401.6
0.004180
1012_at
298.2
0.378184
1013_at
14.0
0.837065
1014_at
933.8
0.031336
1015_s_at
73.0
0.926170
1016_s_at
41.3
0.951005
1017_at
152.7
0.765443
1018_at
59.2
0.861235
Total number of rows: 12625 Table truncated, full table size 297 Kbytes .Supplementary data files not provided