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Status
Public on Apr 21, 2003
Title
HDMTX_MP-6
Sample type
RNA
Source name
Primary Acute Lymphoblastic Leukemia Cells
Organism
Homo sapiens
Extracted molecule
total RNA
Description
Sample User: jmorris Description: ALL-post patient study Comments: Experiment User: dpatel Algorithm: Statistical Corner+ Avg:265, Count:32 Corner- Avg:37187, Count:32 BF: Alpha1:0.04,Alpha2:0.06,Tau:0.015,Gamma1H:0.0025,Gamma1L:0.0025,Gamma2H:0.003,Gamma2L:0.003,Perturbation:1.1,TGT:500,NF:1.000000,SF:7.325640,SFGene:All Background:Avg:391.32,Stdev:10.27,Max:422.7,Min:375.6 Noise:Avg:8.95,Stdev:0.47,Max:10.4,Min:7.8 RawQ:12.57 Keywords = ALL
Submission date
Jan 02, 2003
Last update date
Mar 16, 2009
Contact name
William E Evans
E-mail(s)
william.evans@stjude.org
Phone
901-495-4995
Fax
901-495-6869
URL
http://www.stjude.org/leukemia/bio_evans.htm
Organization name
St.Jude Children's Research Hospital
Department
Pharmaceutical Sciences
Lab
Evans
Street address
332 N. Lauderdale St.
City
Memphis
State/province
TN
ZIP/Postal code
38105
Country
USA
Platform ID
GPL8300
Series (3)
GSE213
HDMTX_MP-6 pair
GSE269
HDMTX_MP
GSE412
Treatment-specific changes in gene expression discriminate in vivo drug response in human leukemia cells
Data table header descriptions
ID_REF
As defined by Affymetrix, these are the probe set identifiers, each of which is unique to a specific probe set defining a specific region of a single gene or set.
VALUE
This is the final calculated meauremeent for each probe set identifer that has been made comparable, through scaling or normalization, accross all samples and rows.
Detection_p_value
Data table
ID_REF
VALUE
Detection_p_value
1000_at
1040.1
0.014937
1001_at
307.8
0.054470
1002_f_at
39.3
0.892699
1003_s_at
112.8
0.732537
1004_at
63.9
0.765443
1005_at
4873.9
0.000219
1006_at
84.2
0.715253
1007_s_at
1862.7
0.000468
1008_f_at
2892.6
0.000805
1009_at
3535.5
0.000266
100_g_at
232.2
0.500000
1010_at
28.5
0.882840
1011_s_at
494.2
0.000673
1012_at
223.1
0.035163
1013_at
50.5
0.765443
1014_at
1318.0
0.005643
1015_s_at
87.0
0.901946
1016_s_at
23.4
0.824011
1017_at
266.0
0.004180
1018_at
72.0
0.795978
Total number of rows: 12625 Table truncated, full table size 296 Kbytes .Supplementary data files not provided