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Sample GSM3417 Query DataSets for GSM3417
Status Public on Apr 21, 2003
Title HDMTX_MP-6
Sample type RNA
 
Source name Primary Acute Lymphoblastic Leukemia Cells
Organism Homo sapiens
Extracted molecule total RNA
 
Description Sample User: jmorris
Description: ALL-post patient study
Comments:
Experiment User: dpatel
Algorithm: Statistical
Corner+ Avg:265, Count:32
Corner- Avg:37187, Count:32
BF: Alpha1:0.04,Alpha2:0.06,Tau:0.015,Gamma1H:0.0025,Gamma1L:0.0025,Gamma2H:0.003,Gamma2L:0.003,Perturbation:1.1,TGT:500,NF:1.000000,SF:7.325640,SFGene:All
Background:Avg:391.32,Stdev:10.27,Max:422.7,Min:375.6
Noise:Avg:8.95,Stdev:0.47,Max:10.4,Min:7.8
RawQ:12.57
Keywords = ALL
 
Submission date Jan 02, 2003
Last update date Mar 16, 2009
Contact name William E Evans
E-mail(s) william.evans@stjude.org
Phone 901-495-4995
Fax 901-495-6869
URL http://www.stjude.org/leukemia/bio_evans.htm
Organization name St.Jude Children's Research Hospital
Department Pharmaceutical Sciences
Lab Evans
Street address 332 N. Lauderdale St.
City Memphis
State/province TN
ZIP/Postal code 38105
Country USA
 
Platform ID GPL8300
Series (3)
GSE213 HDMTX_MP-6 pair
GSE269 HDMTX_MP
GSE412 Treatment-specific changes in gene expression discriminate in vivo drug response in human leukemia cells

Data table header descriptions
ID_REF As defined by Affymetrix, these are the probe set identifiers, each of which is unique to a specific probe set defining a specific region of a single gene or set.
VALUE This is the final calculated meauremeent for each probe set identifer that has been made comparable, through scaling or normalization, accross all samples and rows.
Detection_p_value

Data table
ID_REF VALUE Detection_p_value
1000_at 1040.1 0.014937
1001_at 307.8 0.054470
1002_f_at 39.3 0.892699
1003_s_at 112.8 0.732537
1004_at 63.9 0.765443
1005_at 4873.9 0.000219
1006_at 84.2 0.715253
1007_s_at 1862.7 0.000468
1008_f_at 2892.6 0.000805
1009_at 3535.5 0.000266
100_g_at 232.2 0.500000
1010_at 28.5 0.882840
1011_s_at 494.2 0.000673
1012_at 223.1 0.035163
1013_at 50.5 0.765443
1014_at 1318.0 0.005643
1015_s_at 87.0 0.901946
1016_s_at 23.4 0.824011
1017_at 266.0 0.004180
1018_at 72.0 0.795978

Total number of rows: 12625

Table truncated, full table size 296 Kbytes.




Supplementary data files not provided

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