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Sample GSM3389 Query DataSets for GSM3389
Status Public on Apr 21, 2003
Title HDMTX-3
Sample type RNA
 
Source name Primary Acute Lymphoblastic Leukemia Cells
Organism Homo sapiens
Extracted molecule total RNA
 
Description Sample User: jmorris
Description: ALL-post patient study
Comments:
Experiment User: jmorris
Algorithm: Statistical
Corner+ Avg:273, Count:32
Corner- Avg:37090, Count:32
BF: Alpha1:0.04,Alpha2:0.06,Tau:0.015,Gamma1H:0.0025,Gamma1L:0.0025,Gamma2H:0.003,Gamma2L:0.003,Perturbation:1.1,TGT:500,NF:1.000000,SF:5.683659,SFGene:All
Background:Avg:409.43,Stdev:11.84,Max:460.3,Min:388.3
Noise:Avg:8.85,Stdev:0.62,Max:11.7,Min:7.9
RawQ:12.28
Keywords = ALL
 
Submission date Jan 02, 2003
Last update date Mar 16, 2009
Contact name William E Evans
E-mail(s) william.evans@stjude.org
Phone 901-495-4995
Fax 901-495-6869
URL http://www.stjude.org/leukemia/bio_evans.htm
Organization name St.Jude Children's Research Hospital
Department Pharmaceutical Sciences
Lab Evans
Street address 332 N. Lauderdale St.
City Memphis
State/province TN
ZIP/Postal code 38105
Country USA
 
Platform ID GPL8300
Series (3)
GSE232 HDMTX-3 pair
GSE268 HDMTX
GSE412 Treatment-specific changes in gene expression discriminate in vivo drug response in human leukemia cells

Data table header descriptions
ID_REF As defined by Affymetrix, these are the probe set identifiers, each of which is unique to a specific probe set defining a specific region of a single gene or set.
VALUE This is the final calculated meauremeent for each probe set identifer that has been made comparable, through scaling or normalization, accross all samples and rows.
Detection_p_value

Data table
ID_REF VALUE Detection_p_value
1000_at 745.5 0.027860
1001_at 108.8 0.378184
1002_f_at 142.7 0.561639
1003_s_at 64.9 0.749276
1004_at 510.8 0.043968
1005_at 406.3 0.048995
1006_at 12.5 0.939581
1007_s_at 721.1 0.006532
1008_f_at 1509.5 0.001354
1009_at 5942.7 0.000266
100_g_at 578.3 0.234557
1010_at 50.2 0.732537
1011_s_at 537.0 0.001354
1012_at 317.5 0.024711
1013_at 34.3 0.765443
1014_at 1599.4 0.001141
1015_s_at 89.0 0.901946
1016_s_at 10.1 0.992457
1017_at 163.8 0.339558
1018_at 237.0 0.267463

Total number of rows: 12625

Table truncated, full table size 296 Kbytes.




Supplementary data files not provided

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