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| Status |
Public on May 10, 2024 |
| Title |
Cyclic stretching stimuli promotes HGF and MMP secretion from hESC-derived hepatoblasts and endothelial cells towards liver lobule formation in vitro. |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
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| Summary |
We induced hepatic and endothelial cells simultaneously for day9. We applied cyclic mechancial stimuli (cMS) from day9 to day12. We then performed gene expression profiling analysis using data obtained from RNA-seq of 3 different cells at two time points.
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| Overall design |
15 samples
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| Contributor(s) |
Yoshimoto K, Adachi T, Kamei K |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| Submission date |
May 09, 2023 |
| Last update date |
May 10, 2024 |
| Contact name |
Koki Yoshimoto |
| E-mail(s) |
yoshimoto.koki.85c@st.kyoto-u.ac.jp
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| Phone |
0757539775
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| Organization name |
Kyoto university
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| Department |
iCeMS
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| Lab |
Kamei lab
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| Street address |
Sakyoku-Yoshida-Ushinomiyac-ho1
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| City |
Kyoto |
| State/province |
Kyoto |
| ZIP/Postal code |
6068302 |
| Country |
Japan |
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| Platforms (1) |
| GPL18573 |
Illumina NextSeq 500 (Homo sapiens) |
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| Samples (15)
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| GSM7315530 |
Day9 mixture, without cMS, rep4 |
| GSM7315531 |
Day9 mixture, without cMS, rep5 |
| GSM7315532 |
Day12 mixture, without cMS, rep1 |
| GSM7315533 |
Day12 mixture, without cMS, rep2 |
| GSM7315534 |
Day12 mixture, without cMS, rep3 |
| GSM7315535 |
Day12 mixture, without cMS, rep4 |
| GSM7315536 |
Day12 mixture, without cMS, rep5 |
| GSM7315537 |
Day12 mixture, with cMS, rep1 |
| GSM7315538 |
Day12 mixture, with cMS, rep2 |
| GSM7315539 |
Day12 mixture, with cMS, rep3 |
| GSM7315540 |
Day12 mixture, with cMS, rep4 |
| GSM7315541 |
Day12 mixture, with cMS, rep5 |
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| Relations |
| BioProject |
PRJNA970861 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE232118_RAW.tar |
73.8 Mb |
(http)(custom) |
TAR (of TXT) |
SRA Run Selector |
| Raw data are available in SRA |
| Processed data provided as supplementary file |
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