|
| Status |
Public on May 03, 2024 |
| Title |
BMDM, untreated, 0 hours, rep1 |
| Sample type |
SRA |
| |
|
| Source name |
BMDM
|
| Organism |
Mus musculus |
| Characteristics |
cell type: BMDM
genotype: WT
treatment: untreated
|
| Extracted molecule |
total RNA |
| Extraction protocol |
RNeasy MinElute Cleanup Kit
TruSeq Stranded mRNA protocol
|
| |
|
| Library strategy |
RNA-Seq |
| Library source |
transcriptomic |
| Library selection |
cDNA |
| Instrument model |
Illumina HiSeq 3000 |
| |
|
| Description |
batch1
BMDM_0h_rep1
|
| Data processing |
snakePipes 2.7.2 was used to generate the count matrix
Supplementary files format and content: counts.tsv
|
| |
|
| Submission date |
Jun 21, 2023 |
| Last update date |
May 03, 2024 |
| Contact name |
Angelika Rambold |
| E-mail(s) |
ramboldlab@gmail.com
|
| Organization name |
Max Planck Institute of Immunobiology and Epigenetics
|
| Department |
Department of Developmental Immunology
|
| Street address |
Stübeweg 51
|
| City |
Freiburg im Breisgau |
| ZIP/Postal code |
79108 |
| Country |
Germany |
| |
|
| Platform ID |
GPL21493 |
| Series (1) |
| GSE235484 |
Functional multi-organelle units control inflammatory lipid metabolism of macrophages |
|
| Relations |
| BioSample |
SAMN35822632 |
| SRA |
SRX20742071 |
