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Sample GSM9840 Query DataSets for GSM9840
Status Public on Aug 06, 2004
Title nl156
Sample type RNA
 
Source name primary acute lymphoblastic leukemia cells
Organism Homo sapiens
Extracted molecule total RNA
 
Description Sample Type: Human Total RNA
Project: Evans
Sample User: jmorris
Experiment User: jmorris
Algorithm: Statistical
Corner+ Avg:50, Count:32
Corner- Avg:4285, Count:32
BF: Alpha1:0.05,Alpha2:0.065,Tau:0.015,Gamma1H:0.0045,Gamma1L:0.0045,Gamma2H:0.006,Gamma2L:0.006,Perturbation:1.1,TGT:500,NF:1.000000,SF:43.003662,SFGene:All
Background:Avg:37.85,Stdev:0.57,Max:39.5,Min:36.4
Noise:Avg:1.33,Stdev:0.04,Max:1.4,Min:1.2
RawQ:1.72
Keywords = ALL
Lot batch =
 
Submission date Sep 06, 2003
Last update date May 28, 2005
Contact name William E Evans
E-mail(s) william.evans@stjude.org
Phone 901-495-4995
Fax 901-495-6869
URL http://www.stjude.org/leukemia/bio_evans.htm
Organization name St.Jude Children's Research Hospital
Department Pharmaceutical Sciences
Lab Evans
Street address 332 N. Lauderdale St.
City Memphis
State/province TN
ZIP/Postal code 38105
Country USA
 
Platform ID GPL96
Series (8)
GSE635 Identification of novel genomic determinants of cellular drug resistance in acute lymphoblastic leukemia.
GSE643 ASP sensitive all ALL
GSE648 VCR sensitive all ALL

Data table header descriptions
ID_REF As defined by Affymetrix, these are the probe set identifiers, each of which is unique to a specific probe set defining a specific region of a single gene or set.
VALUE This is the final calculated meauremeent for each probe set identifer that has been made comparable, through scaling or normalization, accross all samples and rows.
DETECTION P-VALUE Defines the confidence in the calculated signal accurately reflecting the expression level of the specific gene or est that the probe set identifies.

Data table
ID_REF VALUE DETECTION P-VALUE
1007_s_at 807.7 0.043968
1053_at 226.6 0.150527
117_at 222.3 0.339558
121_at 987.8 0.021866
1255_g_at 149.8 0.234557
1294_at 1440.6 0.005643
1316_at 242.1 0.039365
1320_at 44.2 0.765481
1405_i_at 376.7 0.216313
1431_at 26.5 0.679170
1438_at 166.4 0.561639
1487_at 500.1 0.378184
1494_f_at 377.6 0.043968
1598_g_at 882.4 0.302547
160020_at 789.2 0.098054
1729_at 67.7 0.795978
1773_at 482.6 0.089405
177_at 142.2 0.561639
179_at 1080.3 0.358690
1861_at 395.5 0.066865

Total number of rows: 22283

Table truncated, full table size 561 Kbytes.




Supplementary file Size Download File type/resource
GSM9840.CEL.gz 3.0 Mb (ftp)(http) CEL

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