NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM9804 Query DataSets for GSM9804
Status Public on Aug 06, 2004
Title nl120
Sample type RNA
 
Source name primary acute lymphoblastic leukemia cells
Organism Homo sapiens
Extracted molecule total RNA
 
Description Sample Type: Human Total RNA
Project: Evans
Sample User: jmorris
Experiment User: jmorris
Algorithm: Statistical
Corner+ Avg:45, Count:32
Corner- Avg:3350, Count:32
BF: Alpha1:0.05,Alpha2:0.065,Tau:0.015,Gamma1H:0.0045,Gamma1L:0.0045,Gamma2H:0.006,Gamma2L:0.006,Perturbation:1.1,TGT:500,NF:1.000000,SF:71.811424,SFGene:All
Background:Avg:43.54,Stdev:0.79,Max:45.4,Min:41.4
Noise:Avg:1.28,Stdev:0.04,Max:1.4,Min:1.2
RawQ:1.88
Keywords = ALL
Lot batch =
 
Submission date Sep 06, 2003
Last update date May 28, 2005
Contact name William E Evans
E-mail(s) william.evans@stjude.org
Phone 901-495-4995
Fax 901-495-6869
URL http://www.stjude.org/leukemia/bio_evans.htm
Organization name St.Jude Children's Research Hospital
Department Pharmaceutical Sciences
Lab Evans
Street address 332 N. Lauderdale St.
City Memphis
State/province TN
ZIP/Postal code 38105
Country USA
 
Platform ID GPL96
Series (8)
GSE635 Identification of novel genomic determinants of cellular drug resistance in acute lymphoblastic leukemia.
GSE647 PRED resistant all ALL
GSE648 VCR sensitive all ALL

Data table header descriptions
ID_REF As defined by Affymetrix, these are the probe set identifiers, each of which is unique to a specific probe set defining a specific region of a single gene or set.
VALUE This is the final calculated meauremeent for each probe set identifer that has been made comparable, through scaling or normalization, accross all samples and rows.
DETECTION P-VALUE Defines the confidence in the calculated signal accurately reflecting the expression level of the specific gene or est that the probe set identifies.

Data table
ID_REF VALUE DETECTION P-VALUE
1007_s_at 543.1 0.039365
1053_at 655.1 0.073830
117_at 92.8 0.697453
121_at 1322.0 0.009985
1255_g_at 152.0 0.749276
1294_at 1149.1 0.000959
1316_at 315.6 0.054470
1320_at 162.8 0.697453
1405_i_at 311.5 0.462489
1431_at 260.8 0.715253
1438_at 522.5 0.089405
1487_at 571.0 0.358690
1494_f_at 168.4 0.500000
1598_g_at 1100.0 0.204022
160020_at 781.3 0.138765
1729_at 142.0 0.621816
1773_at 478.3 0.060419
177_at 269.7 0.378184
179_at 962.9 0.066865
1861_at 168.6 0.302547

Total number of rows: 22283

Table truncated, full table size 561 Kbytes.




Supplementary file Size Download File type/resource
GSM9804.CEL.gz 2.9 Mb (ftp)(http) CEL

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap