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Sample GSM9780 Query DataSets for GSM9780
Status Public on Aug 06, 2004
Title nl096
Sample type RNA
 
Source name primary acute lymphoblastic leukemia cells
Organism Homo sapiens
Extracted molecule total RNA
 
Description Sample Type: Human Total RNA
Project: Evans
Sample User: jmorris
Experiment User: jmorris
Algorithm: Statistical
Corner+ Avg:52, Count:32
Corner- Avg:4099, Count:32
BF: Alpha1:0.05,Alpha2:0.065,Tau:0.015,Gamma1H:0.0045,Gamma1L:0.0045,Gamma2H:0.006,Gamma2L:0.006,Perturbation:1.1,TGT:500,NF:1.000000,SF:74.218872,SFGene:All
Background:Avg:39.14,Stdev:0.69,Max:40.3,Min:37.2
Noise:Avg:1.18,Stdev:0.04,Max:1.3,Min:1.1
RawQ:1.74
Keywords = ALL
Lot batch =
 
Submission date Sep 06, 2003
Last update date May 28, 2005
Contact name William E Evans
E-mail(s) william.evans@stjude.org
Phone 901-495-4995
Fax 901-495-6869
URL http://www.stjude.org/leukemia/bio_evans.htm
Organization name St.Jude Children's Research Hospital
Department Pharmaceutical Sciences
Lab Evans
Street address 332 N. Lauderdale St.
City Memphis
State/province TN
ZIP/Postal code 38105
Country USA
 
Platform ID GPL96
Series (6)
GSE635 Identification of novel genomic determinants of cellular drug resistance in acute lymphoblastic leukemia.
GSE647 PRED resistant all ALL
GSE649 VCR resistant all ALL

Data table header descriptions
ID_REF As defined by Affymetrix, these are the probe set identifiers, each of which is unique to a specific probe set defining a specific region of a single gene or set.
VALUE This is the final calculated meauremeent for each probe set identifer that has been made comparable, through scaling or normalization, accross all samples and rows.
DETECTION P-VALUE Defines the confidence in the calculated signal accurately reflecting the expression level of the specific gene or est that the probe set identifies.

Data table
ID_REF VALUE DETECTION P-VALUE
1007_s_at 286.6 0.621816
1053_at 25.6 0.960635
117_at 253.7 0.127645
121_at 1651.2 0.002617
1255_g_at 36.0 0.660442
1294_at 1302.0 0.005643
1316_at 376.0 0.107301
1320_at 114.6 0.378184
1405_i_at 27.0 0.951901
1431_at 34.3 0.837065
1438_at 37.4 0.972140
1487_at 425.4 0.541191
1494_f_at 480.5 0.150527
1598_g_at 669.1 0.378184
160020_at 527.0 0.048995
1729_at 62.3 0.972140
1773_at 17.2 0.749276
177_at 208.7 0.458816
179_at 1039.2 0.358690
1861_at 357.9 0.320830

Total number of rows: 22283

Table truncated, full table size 560 Kbytes.




Supplementary file Size Download File type/resource
GSM9780.CEL.gz 2.8 Mb (ftp)(http) CEL

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