GEO help: Mouse over screen elements for information.
Status
Public on Aug 06, 2004
Title
nl039
Sample type
RNA
Source name
primary acute lymphoblastic leukemia cells
Organism
Homo sapiens
Extracted molecule
total RNA
Description
Sample Type: Human Total RNA Project: Evans Sample User: jmorris Experiment User: jmorris Algorithm: Statistical Corner+ Avg:31, Count:32 Corner- Avg:3896, Count:32 BF: Alpha1:0.05,Alpha2:0.065,Tau:0.015,Gamma1H:0.0045,Gamma1L:0.0045,Gamma2H:0.006,Gamma2L:0.006,Perturbation:1.1,TGT:500,NF:1.000000,SF:55.617153,SFGene:All Background:Avg:37.57,Stdev:0.97,Max:39.3,Min:35.2 Noise:Avg:1.27,Stdev:0.04,Max:1.4,Min:1.1 RawQ:1.75 Keywords = ALL Lot batch =
Submission date
Sep 05, 2003
Last update date
May 28, 2005
Contact name
William E Evans
E-mail(s)
william.evans@stjude.org
Phone
901-495-4995
Fax
901-495-6869
URL
http://www.stjude.org/leukemia/bio_evans.htm
Organization name
St.Jude Children's Research Hospital
Department
Pharmaceutical Sciences
Lab
Evans
Street address
332 N. Lauderdale St.
City
Memphis
State/province
TN
ZIP/Postal code
38105
Country
USA
Platform ID
GPL96
Series (6)
GSE635
Identification of novel genomic determinants of cellular drug resistance in acute lymphoblastic leukemia.
GSE645
ASP resistant all ALL
GSE648
VCR sensitive all ALL
GSE654
ASP resistant B-ALL
GSE657
VCR sensitive B-ALL
GSE2351
chemotherapy cross-resistance and treatment response in childhood acute lymphoblastic leukemia
Data table header descriptions
ID_REF
As defined by Affymetrix, these are the probe set identifiers, each of which is unique to a specific probe set defining a specific region of a single gene or set.
VALUE
This is the final calculated meauremeent for each probe set identifer that has been made comparable, through scaling or normalization, accross all samples and rows.
DETECTION P-VALUE
Defines the confidence in the calculated signal accurately reflecting the expression level of the specific gene or est that the probe set identifies.
Data table
ID_REF
VALUE
DETECTION P-VALUE
1007_s_at
700.3
0.031336
1053_at
73.1
0.541184
117_at
45.4
0.849473
121_at
1589.1
0.021866
1255_g_at
178.2
0.320830
1294_at
347.2
0.234557
1316_at
351.9
0.017001
1320_at
32.4
0.926170
1405_i_at
40.7
0.937979
1431_at
281.7
0.218983
1438_at
219.7
0.458816
1487_at
613.1
0.175989
1494_f_at
346.6
0.098054
1598_g_at
516.3
0.358690
160020_at
843.8
0.081337
1729_at
197.9
0.520620
1773_at
334.3
0.378184
177_at
97.8
0.679170
179_at
1267.4
0.107301
1861_at
216.6
0.418069
Total number of rows: 22283 Table truncated, full table size 561 Kbytes .Supplementary file
Size
Download
File type/resource
GSM9723.CEL.gz
2.9 Mb
(ftp) (http)
CEL