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Status
Public on Aug 06, 2004
Title
nl011
Sample type
RNA
Source name
primary acute lymphoblastic leukemia cells
Organism
Homo sapiens
Extracted molecule
total RNA
Description
Sample Type: Human Total RNA Project: Evans Sample User: jmorris Experiment User: jmorris Algorithm: Statistical Corner+ Avg:96, Count:32 Corner- Avg:6288, Count:32 BF: Alpha1:0.05,Alpha2:0.065,Tau:0.015,Gamma1H:0.0045,Gamma1L:0.0045,Gamma2H:0.006,Gamma2L:0.006,Perturbation:1.1,TGT:500,NF:1.000000,SF:15.594237,SFGene:All Background:Avg:44.95,Stdev:0.82,Max:46.8,Min:42.7 Noise:Avg:1.77,Stdev:0.08,Max:2.2,Min:1.6 RawQ:2.08 Keywords = ALL
Submission date
Sep 05, 2003
Last update date
May 28, 2005
Contact name
William E Evans
E-mail(s)
william.evans@stjude.org
Phone
901-495-4995
Fax
901-495-6869
URL
http://www.stjude.org/leukemia/bio_evans.htm
Organization name
St.Jude Children's Research Hospital
Department
Pharmaceutical Sciences
Lab
Evans
Street address
332 N. Lauderdale St.
City
Memphis
State/province
TN
ZIP/Postal code
38105
Country
USA
Platform ID
GPL96
Series (4)
GSE635
Identification of novel genomic determinants of cellular drug resistance in acute lymphoblastic leukemia.
GSE643
ASP sensitive all ALL
GSE646
PRED sensitive all ALL
Data table header descriptions
ID_REF
As defined by Affymetrix, these are the probe set identifiers, each of which is unique to a specific probe set defining a specific region of a single gene or set.
VALUE
This is the final calculated meauremeent for each probe set identifer that has been made comparable, through scaling or normalization, accross all samples and rows.
Detection_p_value
Defines the confidence in the calculated signal accurately reflecting the expression level of the specific gene or est that the probe set identifies.
Data table
ID_REF
VALUE
Detection_p_value
1007_s_at
546.6
0.021866
1053_at
377.2
0.048995
117_at
182.4
0.204022
121_at
1251.3
0.002228
1255_g_at
141.5
0.320830
1294_at
729.0
0.006532
1316_at
52.2
0.438361
1320_at
79.2
0.765443
1405_i_at
260.4
0.012921
1431_at
94.5
0.234557
1438_at
44.2
0.500000
1487_at
332.9
0.204022
1494_f_at
279.5
0.138765
1598_g_at
631.4
0.234557
160020_at
612.7
0.048995
1729_at
390.9
0.000959
1773_at
409.8
0.017001
177_at
126.3
0.320830
179_at
1006.9
0.007543
1861_at
597.7
0.000562
Total number of rows: 22283 Table truncated, full table size 559 Kbytes .Supplementary file
Size
Download
File type/resource
GSM9693.CEL.gz
3.2 Mb
(ftp) (http)
CEL