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Sample GSM9654 Query DataSets for GSM9654
Status Public on Aug 06, 2004
Title nl002
Sample type RNA
 
Source name primary acute lymphoblastic leukemia cells
Organism Homo sapiens
Extracted molecule total RNA
 
Description Sample Type: Human Total RNA
Project: Evans
Sample User: jmorris
Experiment User: jmorris
Algorithm: Statistical
Corner+ Avg:203, Count:32
Corner- Avg:7658, Count:32
BF: Alpha1:0.05,Alpha2:0.065,Tau:0.015,Gamma1H:0.0045,Gamma1L:0.0045,Gamma2H:0.006,Gamma2L:0.006,Perturbation:1.1,TGT:500,NF:1.000000,SF:18.185745,SFGene:All
Background:Avg:47.91,Stdev:0.52,Max:49.1,Min:46.3
Noise:Avg:1.82,Stdev:0.07,Max:2.1,Min:1.6
RawQ:2.14
Keywords = ALL
Lot batch =
 
Submission date Sep 05, 2003
Last update date May 28, 2005
Contact name William E Evans
E-mail(s) william.evans@stjude.org
Phone 901-495-4995
Fax 901-495-6869
URL http://www.stjude.org/leukemia/bio_evans.htm
Organization name St.Jude Children's Research Hospital
Department Pharmaceutical Sciences
Lab Evans
Street address 332 N. Lauderdale St.
City Memphis
State/province TN
ZIP/Postal code 38105
Country USA
 
Platform ID GPL96
Series (8)
GSE635 Identification of novel genomic determinants of cellular drug resistance in acute lymphoblastic leukemia.
GSE643 ASP sensitive all ALL
GSE649 VCR resistant all ALL

Data table header descriptions
ID_REF As defined by Affymetrix, these are the probe set identifiers, each of which is unique to a specific probe set defining a specific region of a single gene or set.
VALUE This is the final calculated meauremeent for each probe set identifer that has been made comparable, through scaling or normalization, accross all samples and rows.
DETECTION P-VALUE Defines the confidence in the calculated signal accurately reflecting the expression level of the specific gene or est that the probe set identifies.

Data table
ID_REF VALUE DETECTION P-VALUE
1007_s_at 646.6 0.004180
1053_at 233.4 0.060419
117_at 351.1 0.073830
121_at 1447.9 0.004180
1255_g_at 71.6 0.458816
1294_at 1468.5 0.000388
1316_at 121.7 0.162935
1320_at 95.3 0.781017
1405_i_at 106.2 0.388782
1431_at 80.7 0.162935
1438_at 577.1 0.011447
1487_at 70.9 0.418069
1494_f_at 459.6 0.024711
1598_g_at 733.3 0.081337
160020_at 695.5 0.048995
1729_at 184.9 0.320830
1773_at 222.8 0.098054
177_at 81.5 0.397994
179_at 925.7 0.019304
1861_at 239.4 0.027860

Total number of rows: 22283

Table truncated, full table size 560 Kbytes.




Supplementary file Size Download File type/resource
GSM9654.CEL.gz 3.1 Mb (ftp)(http) CEL

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