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GEO accession:
Sample GSM6809
Query DataSets for GSM6809
Status
Public on Aug 09, 2003
Title
high dose 24h, replicate 2
Sample type
RNA
Source name
Ws1 human skin fibroblasts
Organism
Homo sapiens
Extracted molecule
total RNA
Description
ATCC number CRL-1502
Submission date
Jun 10, 2003
Last update date
Mar 16, 2009
Contact name
Massimiliano Gentile
E-mail(s)
massimiliano.gentile@helsinki.fi
Phone
+358-9-47448726
Fax
+358-9-1912 5554
URL
http://www.bioinfo.helsinki.fi
Organization name
Biomedicum Helsinki
Department
Biomedicum Bioinformatics Unit
Lab
Biomedicum Bioinformatics Unit
Street address
Haartmaninkatu 8
City
Helsinki
State/province
Finland
ZIP/Postal code
000 14
Country
Finland
Platform ID
GPL8300
Series (2)
GSE448
WS1 response to high dose of UV-C
GSE713
UV radiation-induced DNA damage
Data table header descriptions
ID_REF
Stat Pairs
number of probe pairs on the probe array for a specific gene target
Stat Pairs Used
number of probe pairs used in calculating VALUE
VALUE
calculated using statistical algorithm in Affy MAS 5 software
ABS_CALL
detection call based on MAS 5
Detection p-value
p-value of detection call based on MAS 5
Data table
ID_REF
Stat Pairs
Stat Pairs Used
VALUE
ABS_CALL
Detection p-value
AFFX-MurIL2_at
20
20
43.0
A
0.544587
AFFX-MurIL10_at
20
20
4.0
A
0.659339
AFFX-MurIL4_at
20
20
1.2
A
0.987453
AFFX-MurFAS_at
20
20
3.3
A
0.937071
AFFX-BioB-5_at
20
20
139.5
P
0.001796
AFFX-BioB-M_at
20
20
361.8
P
0.000581
AFFX-BioB-3_at
20
20
157.4
P
0.000662
AFFX-BioC-5_at
20
20
675.6
P
0.000070
AFFX-BioC-3_at
20
20
421.9
P
0.000081
AFFX-BioDn-5_at
20
20
432.2
P
0.000060
AFFX-BioDn-3_at
20
20
2542.1
P
0.000081
AFFX-CreX-5_at
20
20
3980.5
P
0.000044
AFFX-CreX-3_at
20
20
5404.6
P
0.000052
AFFX-BioB-5_st
20
20
6.5
A
0.672935
AFFX-BioB-M_st
20
20
9.5
A
0.760937
AFFX-BioB-3_st
20
20
10.5
A
0.672921
AFFX-BioC-5_st
20
20
14.3
A
0.645547
AFFX-BioC-3_st
20
20
11.9
A
0.699394
AFFX-BioDn-5_st
20
20
27.8
A
0.300606
AFFX-BioDn-3_st
20
20
70.2
P
0.033677
Total number of rows:
12625
Table truncated, full table size
385 Kbytes
.
Supplementary data files not provided
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