GEO Publications
Handout
NAR 2024 (latest)
NAR 2002 (original)
All publications
FAQ
MIAME
Email GEO
NCBI
>
GEO
>
Accession Display
Not logged in |
Login
GEO help:
Mouse over screen elements for information.
Scope:
Self
Platform
Samples
Series
Family
Format:
HTML
SOFT
MINiML
Amount:
Brief
Quick
GEO accession:
Sample GSM6800
Query DataSets for GSM6800
Status
Public on Aug 09, 2003
Title
control 24h, replicate 1
Sample type
RNA
Source name
WS1 human skin fibroblasts
Organism
Homo sapiens
Extracted molecule
total RNA
Description
ATCC number CRL-1502
Submission date
Jun 10, 2003
Last update date
Mar 16, 2009
Contact name
Massimiliano Gentile
E-mail(s)
massimiliano.gentile@helsinki.fi
Phone
+358-9-47448726
Fax
+358-9-1912 5554
URL
http://www.bioinfo.helsinki.fi
Organization name
Biomedicum Helsinki
Department
Biomedicum Bioinformatics Unit
Lab
Biomedicum Bioinformatics Unit
Street address
Haartmaninkatu 8
City
Helsinki
State/province
Finland
ZIP/Postal code
000 14
Country
Finland
Platform ID
GPL8300
Series (3)
GSE448
WS1 response to high dose of UV-C
GSE449
WS1 response to low dose of UV-C
GSE713
UV radiation-induced DNA damage
Data table header descriptions
ID_REF
Stat Pairs
number of Affy probe pairs for gene target
Stat Pairs Used
number of probe pairs used for calculating VALUE
VALUE
calculated using statistical algorithm in Affy MAS 5 software
ABS_CALL
detection call as defined by Affy in MAS 5
Detection p-value
p-value on detection call as defined by Affy in MAS 5
Data table
ID_REF
Stat Pairs
Stat Pairs Used
VALUE
ABS_CALL
Detection p-value
AFFX-MurIL2_at
20
20
16.5
A
0.737173
AFFX-MurIL10_at
20
20
27.3
A
0.544587
AFFX-MurIL4_at
20
20
1.2
A
0.916408
AFFX-MurFAS_at
20
20
2.0
A
0.916408
AFFX-BioB-5_at
20
20
223.6
P
0.002867
AFFX-BioB-M_at
20
20
453.4
P
0.000147
AFFX-BioB-3_at
20
20
296.1
P
0.000195
AFFX-BioC-5_at
20
20
802.7
P
0.000070
AFFX-BioC-3_at
20
20
574.3
P
0.000052
AFFX-BioDn-5_at
20
20
570.3
P
0.000052
AFFX-BioDn-3_at
20
20
4165.5
P
0.000095
AFFX-CreX-5_at
20
20
6148.6
P
0.000044
AFFX-CreX-3_at
20
20
10332.1
P
0.000044
AFFX-BioB-5_st
20
20
54.3
A
0.195266
AFFX-BioB-M_st
20
20
12.6
A
0.712257
AFFX-BioB-3_st
20
20
10.7
A
0.574044
AFFX-BioC-5_st
20
20
4.9
A
0.852061
AFFX-BioC-3_st
20
20
11.4
A
0.559354
AFFX-BioDn-5_st
20
20
68.1
A
0.131361
AFFX-BioDn-3_st
20
20
98.2
A
0.062929
Total number of rows:
12625
Table truncated, full table size
385 Kbytes
.
Supplementary data files not provided
|
NLM
|
NIH
|
GEO Help
|
Disclaimer
|
Accessibility
|
