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GEO accession:
Sample GSM6799
Query DataSets for GSM6799
Status
Public on Aug 09, 2003
Title
control 6h, replicate 2
Sample type
RNA
Source name
WS1 human skin fibroblasts
Organism
Homo sapiens
Extracted molecule
total RNA
Description
Mortal human skin fibroblast cell line
ATCC number CRL-1502
Submission date
Jun 10, 2003
Last update date
Mar 16, 2009
Contact name
Massimiliano Gentile
E-mail(s)
massimiliano.gentile@helsinki.fi
Phone
+358-9-47448726
Fax
+358-9-1912 5554
URL
http://www.bioinfo.helsinki.fi
Organization name
Biomedicum Helsinki
Department
Biomedicum Bioinformatics Unit
Lab
Biomedicum Bioinformatics Unit
Street address
Haartmaninkatu 8
City
Helsinki
State/province
Finland
ZIP/Postal code
000 14
Country
Finland
Platform ID
GPL8300
Series (3)
GSE448
WS1 response to high dose of UV-C
GSE449
WS1 response to low dose of UV-C
GSE713
UV radiation-induced DNA damage
Data table header descriptions
ID_REF
Stat Pairs
number of probe pairs on the probe array for a specific gene target
Stat Pairs Used
number of probe pairs used in calculating VALUE
VALUE
calculated using statistical algorithm in Affy MAS 5 software
ABS_CALL
detection call based on MAS 5
Detection p-value
p-value of detection call based on MAS 5
Data table
ID_REF
Stat Pairs
Stat Pairs Used
VALUE
ABS_CALL
Detection p-value
AFFX-MurIL2_at
20
20
5.4
A
0.843268
AFFX-MurIL10_at
20
20
14.4
A
0.631562
AFFX-MurIL4_at
20
20
9.9
A
0.760956
AFFX-MurFAS_at
20
20
5.1
A
0.898032
AFFX-BioB-5_at
20
20
119.1
P
0.008440
AFFX-BioB-M_at
20
20
276.5
P
0.000390
AFFX-BioB-3_at
20
20
128.9
P
0.002023
AFFX-BioC-5_at
20
20
408.2
P
0.000095
AFFX-BioC-3_at
20
20
379.0
P
0.000110
AFFX-BioDn-5_at
20
20
423.3
P
0.000081
AFFX-BioDn-3_at
20
20
2343.9
P
0.000110
AFFX-CreX-5_at
20
20
3934.3
P
0.000044
AFFX-CreX-3_at
20
20
5829.0
P
0.000044
AFFX-BioB-5_st
20
20
7.5
A
0.631562
AFFX-BioB-M_st
20
20
29.5
A
0.382599
AFFX-BioB-3_st
20
20
3.8
A
0.834139
AFFX-BioC-5_st
20
20
9.2
A
0.941556
AFFX-BioC-3_st
20
20
2.3
A
0.794268
AFFX-BioDn-5_st
20
20
36.1
A
0.250796
AFFX-BioDn-3_st
20
20
42.7
A
0.139482
Total number of rows:
12625
Table truncated, full table size
385 Kbytes
.
Supplementary data files not provided
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