GEO Publications
Handout
NAR 2024 (latest)
NAR 2002 (original)
All publications
FAQ
MIAME
Email GEO
NCBI
>
GEO
>
Accession Display
Not logged in |
Login
GEO help:
Mouse over screen elements for information.
Scope:
Self
Platform
Samples
Series
Family
Format:
HTML
SOFT
MINiML
Amount:
Brief
Quick
GEO accession:
Sample GSM46839
Query DataSets for GSM46839
Status
Public on Mar 31, 2005
Title
Ovary - 1351
Sample type
RNA
Source name
Ovary
Organism
Homo sapiens
Extracted molecule
total RNA
Description
Quality metric = 28S to 18S: 1.5
Patient Age: 60-70
Gender: Female
Ethnic Background: Caucasian
Tobacco Use : No
Alcohol Consumption?: Yes
Family History of Cancer?: Yes
Days from Patient Diagnosis to Excision: 4
Presenting Symptoms: Abdominal pain
Presenting Symptoms: Bloating
Pathological T: 3c
Pathological N: X
Pathological M: 0
Pathological Stage: 3C
Pathological Grade: 3
Primary Site: Ovary
Histology: Papillary Serous Carcinoma
Submission date
Mar 31, 2005
Last update date
Aug 28, 2018
Contact name
Erin Curley
E-mail(s)
ecurley@intgen.org
Phone
602-343-8808
Fax
602-343-8440
URL
http://www.intgen.org
Organization name
IGC
Department
Lab
expO
Street address
445 N. 5th Street
City
Phoenix
State/province
AZ
ZIP/Postal code
85004
Country
USA
Platform ID
GPL570
Series (1)
GSE2109
Expression Project for Oncology (expO)
Relations
Reanalyzed by
GSE64985
Reanalyzed by
GSE119087
Data table header descriptions
ID_REF
The name of the probe set, blank for control probes
VALUE
The signal value calculated by MAS5, normalized
ABS_CALL
The detection value calculated by the MAS5
DETECTION P-VALUE
The detection p-value calculated by the MAS5
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
224508.1
P
4.4e-005
AFFX-BioB-M_at
433558.8
P
4.4e-005
AFFX-BioB-3_at
388326.2
P
4.4e-005
AFFX-BioC-5_at
833265
P
4.4e-005
AFFX-BioC-3_at
563649.8
P
4.4e-005
AFFX-BioDn-5_at
1791506.9
P
4.4e-005
AFFX-BioDn-3_at
2337222
P
4.4e-005
AFFX-CreX-5_at
4235262
P
4.4e-005
AFFX-CreX-3_at
4342141
P
4.4e-005
AFFX-DapX-5_at
46.8
A
0.891102
AFFX-DapX-M_at
645.6
A
0.485106
AFFX-DapX-3_at
584.5
A
0.544638
AFFX-LysX-5_at
323
A
0.749335
AFFX-LysX-M_at
474.5
A
0.631695
AFFX-LysX-3_at
383.1
A
0.71239
AFFX-PheX-5_at
637.6
A
0.574063
AFFX-PheX-M_at
40.8
A
0.916852
AFFX-PheX-3_at
40.4
A
0.897914
AFFX-ThrX-5_at
70.8
A
0.94986
AFFX-ThrX-M_at
72.3
A
0.891483
Total number of rows:
54675
Table truncated, full table size
1455 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM46839.CEL.gz
5.8 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
|
NLM
|
NIH
|
GEO Help
|
Disclaimer
|
Accessibility
|
