NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM2829270 Query DataSets for GSM2829270
Status Public on Oct 23, 2020
Title CD3+CD56- biological replicate 2
Sample type RNA
 
Source name CD3+CD56- lymphocyte subset flow sorted by PBMCs
Organism Homo sapiens
Characteristics cell type: T cell
cell subset: CD3+CD56-
Treatment protocol Cells were not treated in any way
Growth protocol Cells were flow sorted and frozen immediately upon isolation
Extracted molecule total RNA
Extraction protocol The RNA was extracted according the RNNeasy Plus Micro Handbook 12/2014 and eluted using 20µl H2O
Label biotin
Label protocol The RNA was labeled using 2 ng and the GeneChip Pico Reagent kit and according to AffymetrixÕs protocol
 
Hybridization protocol Hybridization is an integral part of the GeneChip Pico protocol (Cartridge Array Hybridization on the GeneChip¨ Instrument)
Scan protocol The arrays were scanned on a GeneChip scanner 3000 7G
Description Gene expression data from human lymphocytes
Data processing Data was analyzed using the the Affymetrix Expression Console software. Normalization was done by RMA normalization
 
Submission date Oct 24, 2017
Last update date Oct 23, 2020
Contact name Mario Galgani
E-mail(s) mario.galgani@unina.it
Organization name IEOS Istituto per l'endocrinologia e l'oncologia sperimentale
Street address via S. Pansini, 5
City Naples
ZIP/Postal code 80131
Country Italy
 
Platform ID GPL23159
Series (1)
GSE106082 Transcriptome of T cell subsets

Data table header descriptions
ID_REF
VALUE RMA normalized signal

Data table
ID_REF VALUE
TC0100006437.hg.1 4.648658
TC0100006476.hg.1 5.119802
TC0100006479.hg.1 7.160649
TC0100006480.hg.1 7.490108
TC0100006483.hg.1 8.278662
TC0100006486.hg.1 7.084417
TC0100006490.hg.1 5.201078
TC0100006492.hg.1 6.378125
TC0100006494.hg.1 5.405883
TC0100006497.hg.1 4.475287
TC0100006499.hg.1 6.827214
TC0100006501.hg.1 5.688858
TC0100006502.hg.1 4.469931
TC0100006514.hg.1 3.994109
TC0100006516.hg.1 5.572344
TC0100006517.hg.1 4.571634
TC0100006524.hg.1 6.364438
TC0100006540.hg.1 5.979899
TC0100006548.hg.1 3.48578
TC0100006550.hg.1 5.847528

Total number of rows: 24351

Table truncated, full table size 659 Kbytes.




Supplementary file Size Download File type/resource
GSM2829270_Human_3+56--2.CEL.gz 1.1 Mb (ftp)(http) CEL
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap