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GEO accession:
Sample GSM2817
Query DataSets for GSM2817
Status
Public on Nov 21, 2002
Title
Mnk_3226-T-B
Sample type
RNA
Source name
PBMC from Rhesus Macaque
Organism
Macaca mulatta
Extracted molecule
total RNA
Description
Animal #3226
Typical progression group
Baseline Un-Infected
Submission date
Nov 21, 2002
Last update date
May 27, 2005
Contact name
Maryanne Vahey
E-mail(s)
mvahey@hivresearch.org
Phone
301-251-5058
Fax
301-762-7460
Organization name
Walter Reed Army Institute of Research
Department
Lab
Laboratory of Functional Genomics
Street address
1600 East Gude Drive
City
Rockville
State/province
MD
ZIP/Postal code
20850
Country
USA
Platform ID
GPL80
Series (1)
GSE512
Peripheral Blood Mononuclear Cells of Rhesus Macaques Infected with SIVmac251
Data table header descriptions
ID_REF
Positive
Number of positive probe pairs
Negative
Number of negative probe pairs
Pairs In Avg
Trimmed probe pair set
Pos Fraction
Positive/pairs used
VALUE
Average difference intensity
ABS_CALL
Absolute call of Presence or Absence of gene transcript in sample
Data table
ID_REF
Positive
Negative
Pairs In Avg
Pos Fraction
VALUE
ABS_CALL
AFFX-BioB-5_at
14
3
19
0.7
42140.9
P
AFFX-BioB-M_at
13
1
20
0.65
37665.7
P
AFFX-BioB-3_at
10
3
20
0.5
14880.9
P
AFFX-BioC-5_at
16
1
19
0.8
62180
P
AFFX-BioC-3_at
17
0
20
0.85
65485.6
P
AFFX-BioDn-5_at
18
0
19
0.9
40205
P
AFFX-BioDn-3_at
15
1
18
0.75
109367.8
P
AFFX-CreX-5_at
19
0
20
0.95
581254.3
P
AFFX-CreX-3_at
20
0
20
1
705677.1
P
AFFX-BioB-5_st
8
6
19
0.4
4211.9
A
AFFX-BioB-M_st
5
6
18
0.25
365.5
A
AFFX-BioB-3_st
5
9
20
0.25
-7492.3
A
AFFX-BioC-5_st
4
11
17
0.2
-4910.9
A
AFFX-BioC-3_st
7
6
18
0.35
-1169.6
A
AFFX-BioDn-5_st
5
7
19
0.25
-2400.1
A
AFFX-BioDn-3_st
6
4
18
0.3
4905.3
A
AFFX-CreX-5_st
6
8
19
0.3
605.1
A
AFFX-CreX-3_st
7
6
19
0.35
-2273.4
A
hum_alu_at
61
0
69
0.88
959400.6
P
AFFX-DapX-5_at
7
3
18
0.35
10582.2
A
Total number of rows:
7129
Table truncated, full table size
223 Kbytes
.
Supplementary data files not provided
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