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GEO accession:
Sample GSM2813
Query DataSets for GSM2813
Status
Public on Nov 21, 2002
Title
Mnk_3220-S-7
Sample type
RNA
Source name
PBMC from Rhesus Macaque
Organism
Macaca mulatta
Extracted molecule
total RNA
Description
Animal #3220
Slow progression group
Seven weeks post-Infection with SIV MAC251
Submission date
Nov 21, 2002
Last update date
May 27, 2005
Contact name
Maryanne Vahey
E-mail(s)
mvahey@hivresearch.org
Phone
301-251-5058
Fax
301-762-7460
Organization name
Walter Reed Army Institute of Research
Department
Lab
Laboratory of Functional Genomics
Street address
1600 East Gude Drive
City
Rockville
State/province
MD
ZIP/Postal code
20850
Country
USA
Platform ID
GPL80
Series (1)
GSE512
Peripheral Blood Mononuclear Cells of Rhesus Macaques Infected with SIVmac251
Data table header descriptions
ID_REF
Positive
Number of positive probe pairs
Negative
Number of negative probe pairs
Pairs In Avg
Trimmed probe pair set
Pos Fraction
Positive/pairs used
VALUE
Average difference intensity
ABS_CALL
Absolute call of Presence or Absence of gene transcript in sample
Data table
ID_REF
Positive
Negative
Pairs In Avg
Pos Fraction
VALUE
ABS_CALL
AFFX-BioB-5_at
17
1
19
0.85
23121.1
P
AFFX-BioB-M_at
19
0
19
0.95
29226.4
P
AFFX-BioB-3_at
19
0
19
0.95
21396.2
P
AFFX-BioC-5_at
19
0
19
0.95
57924.4
P
AFFX-BioC-3_at
19
0
20
0.95
61804.1
P
AFFX-BioDn-5_at
19
0
20
0.95
32599.9
P
AFFX-BioDn-3_at
17
0
19
0.85
80788.9
P
AFFX-CreX-5_at
20
0
20
1
349388.4
P
AFFX-CreX-3_at
20
0
20
1
414248.2
P
AFFX-BioB-5_st
5
5
19
0.25
1384
A
AFFX-BioB-M_st
3
4
17
0.15
-808.9
A
AFFX-BioB-3_st
6
7
20
0.3
-2242.8
A
AFFX-BioC-5_st
4
6
17
0.2
-1267.2
A
AFFX-BioC-3_st
5
3
17
0.25
309.2
A
AFFX-BioDn-5_st
8
4
19
0.4
2122.1
A
AFFX-BioDn-3_st
7
1
19
0.35
3118.3
P
AFFX-CreX-5_st
7
1
18
0.35
2358
P
AFFX-CreX-3_st
8
3
18
0.4
1695.8
A
hum_alu_at
65
0
69
0.94
886029.2
P
AFFX-DapX-5_at
1
4
19
0.05
-744.5
A
Total number of rows:
7129
Table truncated, full table size
219 Kbytes
.
Supplementary data files not provided
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