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GEO accession:
Sample GSM2794
Query DataSets for GSM2794
Status
Public on Nov 21, 2002
Title
Mnk_3176-R-3
Sample type
RNA
Source name
PBMC from Rhesus Macaque
Organism
Macaca mulatta
Extracted molecule
total RNA
Description
Animal #3176
Rapid progression group
Three weeks Post infection with SIV MAC251
Submission date
Nov 21, 2002
Last update date
May 27, 2005
Contact name
Maryanne Vahey
E-mail(s)
mvahey@hivresearch.org
Phone
301-251-5058
Fax
301-762-7460
Organization name
Walter Reed Army Institute of Research
Department
Lab
Laboratory of Functional Genomics
Street address
1600 East Gude Drive
City
Rockville
State/province
MD
ZIP/Postal code
20850
Country
USA
Platform ID
GPL80
Series (1)
GSE512
Peripheral Blood Mononuclear Cells of Rhesus Macaques Infected with SIVmac251
Data table header descriptions
ID_REF
Positive
Number of positive probe pairs
Negative
Number of negative probe pairs
Pairs In Avg
Trimmed probe pair set
Pos Fraction
Positive/pairs used
VALUE
Average difference intensity
ABS_CALL
Absolute call of Presence or Absence of gene transcript in sample
Data table
ID_REF
Positive
Negative
Pairs In Avg
Pos Fraction
VALUE
ABS_CALL
AFFX-BioB-5_at
15
1
19
0.75
39033.5
P
AFFX-BioB-M_at
18
0
19
0.9
46728
P
AFFX-BioB-3_at
18
0
20
0.9
42852.7
P
AFFX-BioC-5_at
19
0
19
0.95
88275.1
P
AFFX-BioC-3_at
19
0
20
0.95
93585.7
P
AFFX-BioDn-5_at
18
0
19
0.9
44715.9
P
AFFX-BioDn-3_at
16
0
19
0.8
124718.6
P
AFFX-CreX-5_at
20
0
20
1
585649.4
P
AFFX-CreX-3_at
20
0
20
1
746288.1
P
AFFX-BioB-5_st
5
5
19
0.25
2338.3
A
AFFX-BioB-M_st
6
6
18
0.3
-293
A
AFFX-BioB-3_st
6
8
20
0.3
-4902.3
A
AFFX-BioC-5_st
3
8
17
0.15
-2969
A
AFFX-BioC-3_st
3
6
18
0.15
-790.4
A
AFFX-BioDn-5_st
6
5
19
0.3
3772
A
AFFX-BioDn-3_st
6
4
19
0.3
3424.2
A
AFFX-CreX-5_st
6
3
18
0.3
2342.6
A
AFFX-CreX-3_st
7
4
18
0.35
1662.4
A
hum_alu_at
63
0
69
0.91
1450539.6
P
AFFX-DapX-5_at
3
2
18
0.15
-793.8
A
Total number of rows:
7129
Table truncated, full table size
220 Kbytes
.
Supplementary data files not provided
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