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GEO accession:
Sample GSM2787
Query DataSets for GSM2787
Status
Public on Nov 21, 2002
Title
Mnk_3137-T-B
Sample type
RNA
Source name
PBMC from Rhesus Macaque
Organism
Macaca mulatta
Extracted molecule
total RNA
Description
Animal #3137
Typical progression group
Baseline uninfected sample
Submission date
Nov 21, 2002
Last update date
May 27, 2005
Contact name
Maryanne Vahey
E-mail(s)
mvahey@hivresearch.org
Phone
301-251-5058
Fax
301-762-7460
Organization name
Walter Reed Army Institute of Research
Department
Lab
Laboratory of Functional Genomics
Street address
1600 East Gude Drive
City
Rockville
State/province
MD
ZIP/Postal code
20850
Country
USA
Platform ID
GPL80
Series (1)
GSE512
Peripheral Blood Mononuclear Cells of Rhesus Macaques Infected with SIVmac251
Data table header descriptions
ID_REF
Positive
Number of positive probe pairs
Negative
Number of negative probe pairs
Pairs In Avg
Trimmed probe pair set
Pos Fraction
Positive/pairs used
VALUE
Average difference intensity
ABS_CALL
Absolute call of Presence or Absence of gene transcript in sample
Data table
ID_REF
Positive
Negative
Pairs In Avg
Pos Fraction
VALUE
ABS_CALL
AFFX-BioB-5_at
15
3
19
0.75
23341.1
P
AFFX-BioB-M_at
14
1
20
0.7
22048.2
P
AFFX-BioB-3_at
11
4
20
0.55
10943.5
A
AFFX-BioC-5_at
16
0
19
0.8
34400.9
P
AFFX-BioC-3_at
17
0
20
0.85
35171.4
P
AFFX-BioDn-5_at
17
0
19
0.85
21758.8
P
AFFX-BioDn-3_at
15
1
18
0.75
69600.7
P
AFFX-CreX-5_at
19
0
20
0.95
333384.1
P
AFFX-CreX-3_at
20
0
20
1
424055.3
P
AFFX-BioB-5_st
7
2
19
0.35
4122.8
M
AFFX-BioB-M_st
6
7
20
0.3
636
A
AFFX-BioB-3_st
4
9
19
0.2
-4951.1
A
AFFX-BioC-5_st
3
9
17
0.15
-2332
A
AFFX-BioC-3_st
4
6
19
0.2
-1731.8
A
AFFX-BioDn-5_st
6
7
18
0.3
320.7
A
AFFX-BioDn-3_st
6
2
18
0.3
2985.8
A
AFFX-CreX-5_st
7
7
19
0.35
412.4
A
AFFX-CreX-3_st
6
7
19
0.3
-881.3
A
hum_alu_at
64
0
69
0.93
757346.5
P
AFFX-DapX-5_at
6
4
19
0.3
4287
A
Total number of rows:
7129
Table truncated, full table size
221 Kbytes
.
Supplementary data files not provided
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