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Sample GSM2784 Query DataSets for GSM2784
Status Public on Nov 21, 2002
Title Mnk_3133-S-B
Sample type RNA
 
Source name PBMC of Rhesus Macaque
Organism Macaca mulatta
Extracted molecule total RNA
 
Description Animal #3133
Slow progression group
Baseline uninfected sample
 
Submission date Nov 21, 2002
Last update date May 27, 2005
Contact name Maryanne Vahey
E-mail(s) mvahey@hivresearch.org
Phone 301-251-5058
Fax 301-762-7460
Organization name Walter Reed Army Institute of Research
Department
Lab Laboratory of Functional Genomics
Street address 1600 East Gude Drive
City Rockville
State/province MD
ZIP/Postal code 20850
Country USA
 
Platform ID GPL80
Series (1)
GSE512 Peripheral Blood Mononuclear Cells of Rhesus Macaques Infected with SIVmac251

Data table header descriptions
ID_REF
Positive Number of positive probe pairs
Negative Number of negative probe pairs
Pairs In Avg Trimmed probe pair set
Pos Fraction Positive/pairs used
VALUE Average difference intensity
ABS_CALL Absolute call of Presence or Absence of gene transcript in sample

Data table
ID_REF Positive Negative Pairs In Avg Pos Fraction VALUE ABS_CALL
AFFX-BioB-5_at 17 1 19 0.85 37598.1 P
AFFX-BioB-M_at 18 0 19 0.9 39759.9 P
AFFX-BioB-3_at 16 0 19 0.8 31072 P
AFFX-BioC-5_at 18 0 19 0.9 78992.3 P
AFFX-BioC-3_at 19 0 20 0.95 84729.8 P
AFFX-BioDn-5_at 18 0 20 0.9 38283.8 P
AFFX-BioDn-3_at 16 1 18 0.8 122472.9 P
AFFX-CreX-5_at 19 0 19 0.95 447117.8 P
AFFX-CreX-3_at 20 0 20 1 630583.8 P
AFFX-BioB-5_st 6 7 19 0.3 1667.7 A
AFFX-BioB-M_st 3 6 18 0.15 -1515.3 A
AFFX-BioB-3_st 8 8 20 0.4 -4862.3 A
AFFX-BioC-5_st 5 7 17 0.25 -1138.9 A
AFFX-BioC-3_st 6 6 18 0.3 742.8 A
AFFX-BioDn-5_st 7 4 19 0.35 2048.3 A
AFFX-BioDn-3_st 6 2 18 0.3 1987 A
AFFX-CreX-5_st 7 5 19 0.35 2265.6 A
AFFX-CreX-3_st 6 3 18 0.3 3120.6 A
hum_alu_at 66 0 69 0.96 1034008.1 P
AFFX-DapX-5_at 4 2 20 0.2 174.7 A

Total number of rows: 7129

Table truncated, full table size 220 Kbytes.




Supplementary data files not provided

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