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GEO accession:
Sample GSM2618
Query DataSets for GSM2618
Status
Public on Nov 13, 2002
Title
D3_TP-0_I
Sample type
RNA
Source name
Human PBMC
Organism
Homo sapiens
Extracted molecule
total RNA
Description
Donor 3 Time point 0
infected with HIV-1, RF
Submission date
Nov 13, 2002
Last update date
May 27, 2005
Contact name
Maryanne Vahey
E-mail(s)
mvahey@hivresearch.org
Phone
301-251-5058
Fax
301-762-7460
Organization name
Walter Reed Army Institute of Research
Department
Lab
Laboratory of Functional Genomics
Street address
1600 East Gude Drive
City
Rockville
State/province
MD
ZIP/Postal code
20850
Country
USA
Platform ID
GPL80
Series (1)
GSE511
Proliferating normal human peripheral blood mononuclear cells infected with HIV type 1 RF
Data table header descriptions
ID_REF
Positive
Number of positive probe pairs
Negative
Number of negative probe pairs
Pairs in Average
Trimmed probe pair set
Positive Fraction
Positive/pairs used
VALUE
Average difference intensity
ABS_CALL
Absolute call of Presence or Absence of gene transcript in sample
Data table
ID_REF
Positive
Negative
Pairs in Average
Positive Fraction
VALUE
ABS_CALL
AFFX-BioB-5_at
15
2
19
0.75
13458
P
AFFX-BioB-M_at
16
1
18
0.8
14054
P
AFFX-BioB-3_at
16
2
17
0.8
23530
P
AFFX-BioC-5_at
17
0
19
0.85
35926
P
AFFX-BioC-3_at
19
0
20
0.95
51133
P
AFFX-BioDn-5_at
18
0
19
0.9
22736
P
AFFX-BioDn-3_at
18
1
18
0.9
90952
P
AFFX-CreX-5_at
19
0
20
0.95
268519
P
AFFX-CreX-3_at
18
0
20
0.9
257707
P
AFFX-BioB-5_st
9
6
18
0.45
4010
A
AFFX-BioB-M_st
6
3
18
0.3
-995
A
AFFX-BioB-3_st
6
7
19
0.3
-3046
A
AFFX-BioC-5_st
4
7
18
0.2
-5256
A
AFFX-BioC-3_st
9
1
19
0.45
3844
P
AFFX-BioDn-5_st
10
5
19
0.5
5936
A
AFFX-BioDn-3_st
6
3
19
0.3
3194
A
AFFX-CreX-5_st
8
4
19
0.4
3013
A
AFFX-CreX-3_st
6
4
18
0.3
1025
A
hum_alu_at
43
0
69
0.62
201365
P
AFFX-DapX-5_at
9
5
18
0.45
3177
A
Total number of rows:
7129
Table truncated, full table size
208 Kbytes
.
Supplementary data files not provided
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