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GEO accession:
Sample GSM2610
Query DataSets for GSM2610
Status
Public on Nov 13, 2002
Title
D2_TP-12_I
Sample type
RNA
Source name
Himan PBMC
Organism
Homo sapiens
Extracted molecule
total RNA
Description
Donor 2 Time point 12 hours
Post infection with HIV-1, RF
Submission date
Nov 13, 2002
Last update date
May 27, 2005
Contact name
Maryanne Vahey
E-mail(s)
mvahey@hivresearch.org
Phone
301-251-5058
Fax
301-762-7460
Organization name
Walter Reed Army Institute of Research
Department
Lab
Laboratory of Functional Genomics
Street address
1600 East Gude Drive
City
Rockville
State/province
MD
ZIP/Postal code
20850
Country
USA
Platform ID
GPL80
Series (1)
GSE511
Proliferating normal human peripheral blood mononuclear cells infected with HIV type 1 RF
Data table header descriptions
ID_REF
Positive
Number of positive probe pairs
Negative
Number of negative probe pairs
Pairs InAvg
Trimmed probe pair sets
Pos Fraction
Positive/pairs used
VALUE
Average difference intensity
ABS_CALL
Absolute call of Presence or Absence of gene transript in sample
Data table
ID_REF
Positive
Negative
Pairs InAvg
Pos Fraction
VALUE
ABS_CALL
AFFX-BioB-5_at
9
2
19
0.45
11519
P
AFFX-BioB-M_at
14
0
19
0.7
11466
P
AFFX-BioB-3_at
11
3
17
0.55
2166
P
AFFX-BioC-5_at
15
0
19
0.75
24543
P
AFFX-BioC-3_at
15
0
20
0.75
37373
P
AFFX-BioDn-5_at
15
0
19
0.75
12556
P
AFFX-BioDn-3_at
15
2
18
0.75
70246
P
AFFX-CreX-5_at
19
0
20
0.95
248035
P
AFFX-CreX-3_at
19
0
20
0.95
282889
P
AFFX-BioB-5_st
7
4
19
0.35
3663
A
AFFX-BioB-M_st
3
3
18
0.15
-1179
A
AFFX-BioB-3_st
4
3
18
0.2
-2051
A
AFFX-BioC-5_st
4
7
17
0.2
-3774
A
AFFX-BioC-3_st
4
3
19
0.2
1115
A
AFFX-BioDn-5_st
8
4
19
0.4
2775
A
AFFX-BioDn-3_st
4
3
19
0.2
973
A
AFFX-CreX-5_st
7
4
19
0.35
1355
A
AFFX-CreX-3_st
6
3
19
0.3
116
A
hum_alu_at
50
0
69
0.72
254026
P
AFFX-DapX-5_at
7
3
18
0.35
1760
A
Total number of rows:
7129
Table truncated, full table size
208 Kbytes
.
Supplementary data files not provided
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