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GEO accession:
Sample GSM2606
Query DataSets for GSM2606
Status
Public on Nov 13, 2002
Title
D1_TP-72_I
Sample type
RNA
Source name
Human PBMC
Organism
Homo sapiens
Extracted molecule
total RNA
Description
Donor 1 Time point 72 hours
post infection with HIV-1, RF
Submission date
Nov 13, 2002
Last update date
May 27, 2005
Contact name
Maryanne Vahey
E-mail(s)
mvahey@hivresearch.org
Phone
301-251-5058
Fax
301-762-7460
Organization name
Walter Reed Army Institute of Research
Department
Lab
Laboratory of Functional Genomics
Street address
1600 East Gude Drive
City
Rockville
State/province
MD
ZIP/Postal code
20850
Country
USA
Platform ID
GPL80
Series (1)
GSE511
Proliferating normal human peripheral blood mononuclear cells infected with HIV type 1 RF
Data table header descriptions
ID_REF
Positive
Number of positive probe pairs
Negative
Number of negative probe pairs
Pairs InAvg
Trimmed probe pair set
Pos Fraction
Positive/pairs used
VALUE
Average difference intensity
ABS_CALL
Absolute call of Presence or Absence of gene transcript in sample
Data table
ID_REF
Positive
Negative
Pairs InAvg
Pos Fraction
VALUE
ABS_CALL
AFFX-BioB-5_at
13
1
19
0.65
10493
P
AFFX-BioB-M_at
18
0
19
0.9
11539
P
AFFX-BioB-3_at
17
0
19
0.85
11723
P
AFFX-BioC-5_at
18
0
19
0.9
34383
P
AFFX-BioC-3_at
20
0
20
1
41088
P
AFFX-BioDn-5_at
18
0
20
0.9
21350
P
AFFX-BioDn-3_at
18
0
19
0.9
75407
P
AFFX-CreX-5_at
19
0
20
0.95
203833
P
AFFX-CreX-3_at
19
0
20
0.95
223024
P
AFFX-BioB-5_st
6
4
19
0.3
846
A
AFFX-BioB-M_st
6
3
18
0.3
1330
A
AFFX-BioB-3_st
5
8
19
0.25
-1774
A
AFFX-BioC-5_st
5
5
17
0.25
198
A
AFFX-BioC-3_st
4
4
18
0.2
-416
A
AFFX-BioDn-5_st
6
5
19
0.3
3157
A
AFFX-BioDn-3_st
6
2
18
0.3
1370
A
AFFX-CreX-5_st
8
4
20
0.4
2377
A
AFFX-CreX-3_st
8
4
18
0.4
1695
A
hum_alu_at
51
0
69
0.74
189495
P
AFFX-DapX-5_at
3
7
19
0.15
-209
A
Total number of rows:
7129
Table truncated, full table size
206 Kbytes
.
Supplementary data files not provided
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