GEO Publications
Handout
NAR 2024 (latest)
NAR 2002 (original)
All publications
FAQ
MIAME
Email GEO
NCBI
>
GEO
>
Accession Display
Not logged in |
Login
GEO help:
Mouse over screen elements for information.
Scope:
Self
Platform
Samples
Series
Family
Format:
HTML
SOFT
MINiML
Amount:
Brief
Quick
GEO accession:
Sample GSM25854
Query DataSets for GSM25854
Status
Public on Dec 03, 2004
Title
PGA-Hs_V-7
Sample type
RNA
Source name
left ventricle biopsy
Organism
Homo sapiens
Extracted molecule
total RNA
Description
Human subjects with viral cardiomyopathy
Keywords = viral cardiomyopathy
Submission date
Jun 18, 2004
Last update date
Aug 28, 2018
Contact name
Martina Schinke
URL
http://www.cardiogenomics.org
Organization name
Harvard University
Department
Bauer Center for Genomic Research
Lab
Cardiogenomics
Street address
7 Divinity Ave
City
Cambridge
State/province
MA
ZIP/Postal code
02138
Country
USA
Platform ID
GPL570
Series (1)
GSE1145
changes in cardiac transcription profiles brought about by heart failure
Relations
Reanalyzed by
GSE119087
Data table header descriptions
ID_REF
VALUE
'signal' a measure of the abundance of a transcript
ABS_CALL
the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE
'detection p-value', p-value that indicates the significance level of the detection call
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
662.9
P
0.00141
AFFX-BioB-M_at
862.9
P
0.00039
AFFX-BioB-3_at
475.5
P
0.002556
AFFX-BioC-5_at
1348
P
0.000081
AFFX-BioC-3_at
1385.1
P
0.000044
AFFX-BioDn-5_at
1635.1
P
0.00007
AFFX-BioDn-3_at
8632.2
P
0.00039
AFFX-CreX-5_at
17206.2
P
0.00006
AFFX-CreX-3_at
17634.3
P
0.000044
AFFX-DapX-5_at
28.1
A
0.300606
AFFX-DapX-M_at
50.7
A
0.287743
AFFX-DapX-3_at
43.7
A
0.659339
AFFX-LysX-5_at
9.6
A
0.52976
AFFX-LysX-M_at
101.8
A
0.250796
AFFX-LysX-3_at
36.8
A
0.095667
AFFX-PheX-5_at
5.5
A
0.814869
AFFX-PheX-M_at
7.1
A
0.897835
AFFX-PheX-3_at
24.3
A
0.737173
AFFX-ThrX-5_at
41.4
A
0.5
AFFX-ThrX-M_at
23.7
A
0.5
Total number of rows:
54675
Table truncated, full table size
1449 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM25854_PAV_7.cel.gz
5.7 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
|
NLM
|
NIH
|
GEO Help
|
Disclaimer
|
Accessibility
|