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Status
Public on Mar 16, 2004
Title
testis tubular somatic cells GPL341
Sample type
RNA
Source name
22 day old testis, tubular somatic cells
Organism
Rattus norvegicus Extracted molecule
total RNA
Description
50 ng total RNA were amplified using two rounds of amplification. Detection calls were calculated using a Tau value of 0.015. Signal intensities were scaled to an average of 250 (scale factor 0.584).
Submission date
Nov 10, 2003
Last update date
May 28, 2005
Contact name
Nikolaus Schultz
E-mail(s)
schultz@cbio.mskcc.org Phone
646-888-2604
Organization name
Memorial Sloan-Kettering Cancer Center
Department
Computational Biology Center
Street address
1275 York Ave, Box 460
City
New York
State/province
NY
ZIP/Postal code
10065
Country
USA
Platform ID
GPL341 Series (1)
Data table header descriptions ID_REF Affymetrix probe id
VALUE signal intensity
ABS_CALL present (P), absent (A), marginal (M) call
DETECTION P-VALUE p-value that indicates the significance level of the detection call
Data table ID_REF VALUE ABS_CALL DETECTION P-VALUE AFFX-BioB-5_at
170.9
P
0.006187
AFFX-BioB-M_at
221
P
0.000052
AFFX-BioB-3_at
142.1
P
0.000044
AFFX-BioC-5_at
380.1
P
0.00007
AFFX-BioC-3_at
235.1
P
0.00011
AFFX-BioDn-5_at
394.3
P
0.000509
AFFX-BioDn-3_at
1544.3
P
0.00007
AFFX-CreX-5_at
4210.1
P
0.000044
AFFX-CreX-3_at
4867.5
P
0.000044
AFFX-DapX-5_at
12.8
A
0.067678
AFFX-DapX-M_at
17.3
A
0.139482
AFFX-DapX-3_at
2.2
A
0.737173
AFFX-LysX-5_at
0.6
A
0.960339
AFFX-LysX-M_at
17.2
A
0.327079
AFFX-LysX-3_at
8.8
A
0.327079
AFFX-PheX-5_at
2.4
A
0.860518
AFFX-PheX-M_at
1.3
A
0.772364
AFFX-PheX-3_at
5.7
A
0.440646
AFFX-ThrX-5_at
1.7
A
0.843268
AFFX-ThrX-M_at
7.6
A
0.48511
15923 422 Kbytes .Supplementary file Size Download File type/resource GSM12808.CEL.gz
2.6 Mb
(ftp) (http) CEL
