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Sample GSM12268 Query DataSets for GSM12268
Status Public on Nov 25, 2003
Title N1 Normal Human Kidney U133A
Sample type RNA
 
Source name Trizol isolation of total RNA from normal tissue adjacent to Renal Cell Carcinoma
Organism Homo sapiens
Extracted molecule total RNA
 
Description Age = 51; Gender = Male; Left Kidney; Adjacent Tumor Type = clear cell; Adjacent Tumor Fuhrman Grade = 3; Adjacent Tumor Capsule Penetration = false; Adjacent Tumor Perinephric Fat Invasion = false; Adjacent Tumor Renal Sinus Invasion = true; Adjacent Tumor Renal Vein Invasion = true; Adjacent Tumor Location: mid; Scaling Target = 500; Scaling Factor = 4.85; Raw Q = 3.04; Noise = 3.51; Background = 70.54.
Keywords = kidney
Keywords = renal
Keywords = RCC
Keywords = carcinoma
Keywords = cancer
Lot batch = 2004076
 
Submission date Oct 23, 2003
Last update date May 28, 2005
Contact name Marc E. Lenburg
E-mail(s) mlenburg@bu.edu
Phone 617-414-1375
Fax 617-414-1646
URL http://gg.bu.edu
Organization name Boston University School of Medicine
Department Genetics and Genomics
Street address 715 Albany Street, E613B
City Boston
State/province MA
ZIP/Postal code 02130
Country USA
 
Platform ID GPL96
Series (1)
GSE781 Normal and Renal Cell Carcinoma Kidney Tissue, Human

Data table header descriptions
ID_REF
VALUE MAS 5.0 Statistical Algorithm (mean scaled to 500)
ABS_CALL MAS 5.0 Absent, Marginal, Present call with Alpha1 = 0.05, Alpha2 = 0.065

Data table
ID_REF VALUE ABS_CALL
AFFX-BioB-5_at 578.7 P
AFFX-BioB-M_at 1154.4 P
AFFX-BioB-3_at 638.7 P
AFFX-BioC-5_at 1314.5 P
AFFX-BioC-3_at 916.1 P
AFFX-BioDn-5_at 1455.2 P
AFFX-BioDn-3_at 9663.4 P
AFFX-CreX-5_at 12622.8 P
AFFX-CreX-3_at 17619 P
AFFX-DapX-5_at 10.5 A
AFFX-DapX-M_at 82.4 A
AFFX-DapX-3_at 7.6 A
AFFX-LysX-5_at 9.3 A
AFFX-LysX-M_at 14 A
AFFX-LysX-3_at 3.2 A
AFFX-PheX-5_at 3.4 A
AFFX-PheX-M_at 13.8 A
AFFX-PheX-3_at 24.9 A
AFFX-ThrX-5_at 7.9 A
AFFX-ThrX-M_at 64.5 A

Total number of rows: 22283

Table truncated, full table size 402 Kbytes.




Supplementary file Size Download File type/resource
GSM12268.CEL.gz 3.3 Mb (ftp)(http) CEL

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