GEO Publications
Handout
NAR 2024 (latest)
NAR 2002 (original)
All publications
FAQ
MIAME
Email GEO
NCBI
>
GEO
>
Accession Display
Not logged in |
Login
GEO help:
Mouse over screen elements for information.
Scope:
Self
Platform
Samples
Series
Family
Format:
HTML
SOFT
MINiML
Amount:
Brief
Quick
GEO accession:
Sample GSM11805
Query DataSets for GSM11805
Status
Public on Nov 25, 2003
Title
N035 Normal Human Kidney U133A
Sample type
RNA
Source name
Trizol isolation of total RNA from normal tissue adjacent to Renal Cell Carcinoma
Organism
Homo sapiens
Extracted molecule
total RNA
Description
Age = 70; Gender = Female; Right Kidney; Adjacent Tumor Type = clear cell; Adjacent Tumor Fuhrman Grade = 3; Adjacent Tumor Capsule Penetration = true; Adjacent Tumor Perinephric Fat Invasion = true; Adjacent Tumor Renal Sinus Invasion = false; Adjacent Tumor Renal Vein Invasion = true; Scaling Target = 500; Scaling Factor = 7.09; Raw Q = 2.39; Noise = 2.60; Background = 55.24.
Keywords = kidney
Keywords = renal
Keywords = RCC
Keywords = carcinoma
Keywords = cancer
Lot batch = 2004638
Submission date
Oct 20, 2003
Last update date
May 28, 2005
Contact name
Marc E. Lenburg
E-mail(s)
mlenburg@bu.edu
Phone
617-414-1375
Fax
617-414-1646
URL
http://gg.bu.edu
Organization name
Boston University School of Medicine
Department
Genetics and Genomics
Street address
715 Albany Street, E613B
City
Boston
State/province
MA
ZIP/Postal code
02130
Country
USA
Platform ID
GPL96
Series (1)
GSE781
Normal and Renal Cell Carcinoma Kidney Tissue, Human
Data table header descriptions
ID_REF
VALUE
MAS 5.0 Statistical Algorithm (mean scaled to 500)
ABS_CALL
MAS 5.0 Absent, Marginal, Present call with Alpha1 = 0.05, Alpha2 = 0.065
Data table
ID_REF
VALUE
ABS_CALL
AFFX-BioB-5_at
953.9
P
AFFX-BioB-M_at
2982.8
P
AFFX-BioB-3_at
1657.9
P
AFFX-BioC-5_at
2652.7
P
AFFX-BioC-3_at
2019.5
P
AFFX-BioDn-5_at
3531.5
P
AFFX-BioDn-3_at
14950.5
P
AFFX-CreX-5_at
27206.6
P
AFFX-CreX-3_at
36577.9
P
AFFX-DapX-5_at
5
A
AFFX-DapX-M_at
63.8
A
AFFX-DapX-3_at
7.4
A
AFFX-LysX-5_at
5.1
A
AFFX-LysX-M_at
9.4
A
AFFX-LysX-3_at
12.1
A
AFFX-PheX-5_at
6.2
A
AFFX-PheX-M_at
23
A
AFFX-PheX-3_at
37.4
A
AFFX-ThrX-5_at
7.4
A
AFFX-ThrX-M_at
55.5
A
Total number of rows:
22283
Table truncated, full table size
402 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM11805.CEL.gz
3.2 Mb
(ftp)
(http)
CEL
|
NLM
|
NIH
|
GEO Help
|
Disclaimer
|
Accessibility
|
