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Series GSE90797 Query DataSets for GSE90797
Status Public on Mar 31, 2017
Title Molecular reprogramming of granulocyte/macrophage progenitor (GMP) clusters upon induction of BCR/ABL oncogene
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Single cell RNA Seq and bioinformatic analysis are used to study what processes are important for the molecular reprogramming of GMPs once mice develop chronic myelogenous leukemia-like (CML-like) myeloproliferative neoplasm (MPN) upon induction of BCR/ABL oncogene.
 
Overall design Single cell RNA sequencing of GMP cells from mice upon induction of BCR/ABL oncogene
 
Contributor(s) Hérault A, Binnewies M, Leong S, Calero-Nieto FJ, Zhang SY, Kang Y, Wang X, Pietras EM, Chu SH, Barry-Holson K, Armstrong S, Göttgens B, Passegué E
Citation(s) 28355185
Submission date Dec 02, 2016
Last update date May 15, 2019
Contact name Evangelia Diamanti
E-mail(s) ed347@cam.ac.uk
Phone 01223 62317
Organization name University of Cambridge
Department Haematology
Lab Gottgens
Street address Wellcome Trust / MRC Building, Hills Road
City Cambridge
ZIP/Postal code CB2 0XY
Country United Kingdom
 
Platforms (1)
GPL21103 Illumina HiSeq 4000 (Mus musculus)
Samples (384)
GSM2412795 BA-1_10
GSM2412796 BA-1_11
GSM2412797 BA-1_12
This SubSeries is part of SuperSeries:
GSE90799 Molecular reprogramming of granulocyte/macrophage progenitor (GMP) clusters
Relations
BioProject PRJNA355981
SRA SRP094466

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE90797_BA-1_HTSeq_counts.txt.gz 1.4 Mb (ftp)(http) TXT
GSE90797_BA-2_HTSeq_counts.txt.gz 1.3 Mb (ftp)(http) TXT
GSE90797_BA-4_HTSeq_counts.txt.gz 1.5 Mb (ftp)(http) TXT
GSE90797_Control_HTSeq_counts.txt.gz 1.5 Mb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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