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Series GSE65177 Query DataSets for GSE65177
Status Public on Mar 19, 2015
Title RNAseq comparison of gene expression profiles in ScxGFP positive cells and ScxGFP negative cells from E13.5 forelimb samples
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary RNAs were isolated from FACS sorted ScxGFP positive cells and GFP negative cells of forelimbs at E13.5, and characterized by RNAseq
 
Overall design for each sample, 3 pairs of total 6 E13.5 forelimbs were pooled together, both GFP positive cells and GFP negative cells were FACS sorted, then for RNA extraction, cDNA library preparation and proceeded for RNAseq
 
Contributor(s) Rulang J, Han L
Citation(s) 25729011
Submission date Jan 22, 2015
Last update date May 15, 2019
Contact name HAN LIU
E-mail(s) han.liu@cchmc.org
Organization name CINCINNATI CHILDREN'S HOSPITAL
Department DEVELOPMENTAL BIOLOGY
Lab Jiang
Street address 3333 burnet avenue
City cincinnati
State/province oh
ZIP/Postal code 45229
Country USA
 
Platforms (1)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
Samples (2)
GSM1588631 ScxGFP+ cells, E13.5, forelimb
GSM1588632 ScxGFP- cells, E13.5, forelimb
This SubSeries is part of SuperSeries:
GSE65180 limb tendon RNAseq
Relations
SRA SRP052735
BioProject PRJNA273850

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE65177_RAW.tar 1.5 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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