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Series GSE52815 Query DataSets for GSE52815
Status Public on Nov 28, 2013
Title Gene expression in the isolated islets of 10 day old, 4 wk old, 12 wk old, and 20 wk old Non-Obese Diabetic (NOD) mice compared to healthy age matched control NOD.B10 mice
Organism Mus musculus
Experiment type Expression profiling by array
Summary Gene expression in the islets of diseased NOD mice compared to congenic healthy NOD.B10 mice at various ages, during the progression of NOD disease.
 
Overall design Islets were isolated from individual NOD and NOD.B10 mice by collagenase digestion. RNA was extracted using Trizol, combined with the RNeasy micro kit (Qiagen). RNA quality was assessed using the Agilent 2100 Bioanalyzer and the RNA 6000 Pico Reagent Kit (Agilent). Microarrays were performed using the Whole Mouse Genome Microarray Kit, 4×44K 2-color arrays (Agilent Technologies).
 
Contributor(s) Yip L
Citation(s) 24682832
Submission date Nov 27, 2013
Last update date Jan 12, 2017
Contact name Linda Yip
Organization name Stanford University
Department Medicine
Lab C.G. Fathman
Street address 269 Campus Drive West, CCSR Building Rm. 2240
City Stanford
State/province CA
ZIP/Postal code 94305
Country USA
 
Platforms (1)
GPL7202 Agilent-014868 Whole Mouse Genome Microarray 4x44K G4122F (Probe Name version)
Samples (24)
GSM1276615 10 day old NOD-Replicate 1
GSM1276616 10 day old NOD-Replicate 2
GSM1276617 10 day old NOD-Replicate 3
Relations
BioProject PRJNA230123

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE52815_RAW.tar 371.2 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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