NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE47786 Query DataSets for GSE47786
Status Public on Oct 02, 2013
Title Genome-wide analysis of berberine chloride-responsive gene expression in HepG2 liver cell line
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Berberine, an isoquinoline alkaloid isolated from many medicinal herbs such as Coptis chinensis, has a wide range of pharmacological effects. Here, we used gene expression microarray to analyze gene expression profiles of HepG2 human hepatoma cell line after berberine chloride treatment or 0.08% DMSO as control.
 
Overall design Comparing gene expression profiles of 40 µ­M berberine-treated HepG2 human hepatoma cell line to those of control cells sampled after 4 hours treatment. A 50 mM stock solution of Berberine chloride was prepared in DMSO. Cells were treated with 40 µ­M berberine chloride or 0.08% DMSO as control.
 
Contributor(s) Lo T, Chen S
Citation(s) 24098708
Submission date Jun 10, 2013
Last update date Aug 13, 2018
Contact name Ting-fang Lo
E-mail(s) r96b47204@ntu.edu.tw
Phone +886-939964794
Organization name Academia Sinica
Department Institute of Biological Chemistry
Street address 128 Academia Road, Section 2, Nankang, Taipei 115, Taiwan
City Taipei
ZIP/Postal code 115
Country Taiwan
 
Platforms (1)
GPL10558 Illumina HumanHT-12 V4.0 expression beadchip
Samples (2)
GSM1159671 HepG2_control_4hr_rep1
GSM1159672 HepG2_berberine_4hr_rep1
This SubSeries is part of SuperSeries:
GSE47822 Genome-wide expression profiling of HepG2 liver cells after berberine chloride treatment
Relations
BioProject PRJNA208016

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE47786_RAW.tar 26.2 Mb (http)(custom) TAR
GSE47786_non-normalized.txt.gz 770.1 Kb (ftp)(http) TXT
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap