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Series GSE42832 Query DataSets for GSE42832
Status Public on Oct 31, 2013
Title Microarray study using whole blood and purified leucocyte populations from healthy controls and patients with tuberculosis or sarcoidosis with tuberculosis and sarcoidosis
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Whole blood and purified leucocyte populations were compared to determine which cell types the whole blood interferon-inducible signature, found in both tuberculosis and sarcoidosis, was present in. This study agreed with previous publication that the neutrophil was the dominant cell in tuberculosis and also showed it was the dominant cell type in sarcoidosis.
 
Overall design There were 5 patients in each group of healthy controls, tuberculosis and sarcoidosis. The cell types were whole blood, PBMCs, monocytes (CD14), T cells (CD8 and CD4) and neutrophils (CD15).
 
Contributor(s) Bloom CI, Graham CM, Rozakeas F, Wang Y, Redford PS, O'Garra A
Citation(s) 23940611
Submission date Dec 10, 2012
Last update date Aug 13, 2018
Contact name Chloe Bloom
Organization name MRC National Institute for Medical Research
Street address The Ridgeway
City London
ZIP/Postal code NW7 1AA
Country United Kingdom
 
Platforms (1)
GPL10558 Illumina HumanHT-12 V4.0 expression beadchip
Samples (90)
GSM1051040 TB_Whole blood Sample 1 cell separation
GSM1051041 Control_CD4 Sample 2 cell separation
GSM1051042 TB_PBMC Sample 3 cell separation
This SubSeries is part of SuperSeries:
GSE42834 Human whole blood microarray study to compare patients with tuberculosis, sarcoidosis, pneumonia, and lung cancer
Relations
BioProject PRJNA183538

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE42832_RAW.tar 26.2 Mb (http)(custom) TAR
GSE42832_non-normalized.txt.gz 15.3 Mb (ftp)(http) TXT
Processed data included within Sample table

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