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Series GSE42812 Query DataSets for GSE42812
Status Public on Jun 25, 2014
Title CD4+ T cells treated with TNFalpha blocking agents during activation.
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Objective. TNFα is a potent pro-inflammatory cytokine playing a pivotal role in several autoimmune diseases. Neutralizing TNFα inhibits T cell proliferation and IFNγ production, and enhances suppressive capacity of regulatory T cells (Treg). Little is known about the mechanism of TNFα blocking agents on naïve T cell differentiation. Methods. Naïve CD4+ T cells were activated by dendritic cells (DC) in presence or absence of anti-TNFα agents. T cell polarization and activation was assessed during T cell differentiation. In addition, whole genome gene expression analysis was performed on anti-TNFα-treated T cells. Results. Neutralizing TNFα during priming of naïve CD4+ T cells by DC favors development of IL-10+ T helper (Th) cells at the expense of IFNγ induction. TNFα inhibits IL-10 via TNFRII, which becomes expressed after naïve T cell activation. While initial CD4+ T cell activation was not affected, neutralization of TNFα negatively affected later stages of T cell priming by counteracting full T cell activation and survival. Whole genome gene expression analysis revealed a regulatory gene profile of anti-TNFα-treated T cells. Indeed, neutralizing TNFα during naïve T cell priming enhanced the suppressive function of anti-TNFα-treated T cells. Conclusion. Inhibition of TNFα–TNFRII interaction affects late stage effector T cell development and shifts the balance of Th cell differentiation towards IL-10 expressing regulatory T cells, which may be one of the beneficial mechanisms in TNFα blocking therapies.
 
Overall design Naïve CD4+ T cells were CFSE labeled and co-cultured for 13 days with allogeneic dendritic cells in the presence or absence of anti-TNFα agents. After 13 days, the CFSElow T cells were FACS sorted. Samples were generated from three independent donors.
 
Contributor(s) Boks MA, Kager-Groenland JR, van Ham M, ten Brinke A
Citation(s) 24568737
Submission date Dec 08, 2012
Last update date Aug 13, 2018
Contact name Martine A. Boks
E-mail(s) m.boks@vumc.nl
Organization name Sanquin Blood Supply
Department Immunopathology
Street address Plesmanlaan 125
City Amsterdam
ZIP/Postal code 1066 CX
Country Netherlands
 
Platforms (1)
GPL10558 Illumina HumanHT-12 V4.0 expression beadchip
Samples (6)
GSM1050371 untreated rep2
GSM1050372 untreated rep3
GSM1050373 anti-TNFalpha rep1
Relations
BioProject PRJNA183430

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE42812_RAW.tar 26.2 Mb (http)(custom) TAR
GSE42812_non_normalized.txt.gz 2.4 Mb (ftp)(http) TXT
GSE42812_normalized.txt.gz 3.5 Mb (ftp)(http) TXT
Processed data included within Sample table
Processed data are available on Series record

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