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Series GSE40403 Query DataSets for GSE40403
Status Public on Aug 28, 2012
Title The downstream molecules of Notch signaling in vascular endothelial cell senescence
Organism Homo sapiens
Experiment type Expression profiling by array
Summary To further investigate the mechanism how the decline in Notch signaling induces premature senescence in endothelial cells, we performed microarray analysis and identified Id1 nd DUSP1 as the downstream molecules of Notch pathway. In quantitative PCR and western blot analyses, the expression level of Id1 and DUSP1 increased in Notch1 over-expressing endothelial cells and decreased in knockdown similar to the result of microarray.
 
Overall design The gene expression of human unbilical endothelial vein cells (HUVEC) infected with retroviral vectors encoding Jagged1, Jagged1-shRNA, or Notch1-shRNA. HUVEC infected with empty vector was used as a control. In each genotypes, three independent lines at passage 8 were performed.
 
Contributor(s) Yamashita M, Yoshida Y, Sato K
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Submission date Aug 27, 2012
Last update date Jan 23, 2019
Contact name Yohko Yoshida
E-mail(s) yohko105@yahoo.co.jp
Organization name Chiba University Graduate school of medicine
Street address 1-8-1, Inohana, Chuo-ku
City Chiba
ZIP/Postal code 260-8670
Country Japan
 
Platforms (1)
GPL6480 Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Probe Name version)
Samples (12)
GSM992911 Jagged1-OE1
GSM992912 Jagged1-OE2
GSM992913 Jagged1-OE3
Relations
BioProject PRJNA173881

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE40403_All_Samples_Entitylist.txt.gz 7.5 Mb (ftp)(http) TXT
GSE40403_RAW.tar 106.5 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table
Processed data are available on Series record

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