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Series GSE36936 Query DataSets for GSE36936
Status Public on Sep 04, 2012
Title Gene Expression in the Human Mammary Epithelium during Initiation of Lactation.
Organism Homo sapiens
Experiment type Expression profiling by array
Summary We have utilized the RNA isolated from breast milk fat globule (MFG) from lactating women from 6h to 42 days following delivery using the HumanHT-12 v4 Expression BeadChip (Illumina, Inc) to determine the temporal coordination of changes in gene expression in milk substrate synthesis processes. Of the 47,323 gene transcripts on the array, 16,623 transcripts were expressed. Major milk protein genes were among the most highly expressed and induced along with those involved in the metabolic and biosynthetic processes of carbohydrate and lipid. Milk fat synthesis mirrors expression of genes involved in fat synthesis, lipolysis and transport. In the lactose synthesis pathway, expression of α-lactalbumin mRNA was high already in the early milk and did not change. Lactose synthesis paralleled the induction of gene expression of proteins involved in UDP-galactose synthesis and transport.
 
Overall design Serial milk samples were collected 6h following delivery, q12 h for the first 4 days and then weekly for 6 wks from 7 healthy, lean, exclusively breastfeeding women [7 x 15 = 105 samples]. RNA was isolated from the milk fat globules and utilized for microarray analyses.
 
Contributor(s) Mohammad MA, Hadsell DL, Haymond MW
Citation(s) 22649065, 23880316
Submission date Mar 29, 2012
Last update date Aug 13, 2018
Contact name Mahmoud Ali Mohammad
E-mail(s) mohammad@bcm.edu
Organization name Baylor College of Medicine
Department Pediatrics-Nutrition
Lab CNRC-Haymond
Street address 1100 Bates St.
City Houston
State/province Texas
ZIP/Postal code 77030
Country USA
 
Platforms (1)
GPL10558 Illumina HumanHT-12 V4.0 expression beadchip
Samples (105)
GSM906560 Patient 1_ 6h
GSM906561 Patient 2_ 6h
GSM906562 Patient 3_ 6h
Relations
BioProject PRJNA157123

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE36936_RAW.tar 26.2 Mb (http)(custom) TAR
GSE36936_non-normalized.txt.gz 31.4 Mb (ftp)(http) TXT
Processed data included within Sample table

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