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| Status |
Public on Feb 04, 2023 |
| Title |
NPC stem-like cells [Affymetrix] |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by array
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| Summary |
Stem-like cells of nasopharyngeal cancer were enriched by 3 different methods: 1) Side population (SP) assay, 2) LMP2A over-expression and 3) spheroid culture. SP cells and LMP2A over-expressed cells were inoculated into immunocompromised mice for xenograft tumors. Transcriptomes of all 5 of these in vitro and in vivo generated NPC stem-like cells were then analyzed and compared to their counterparts by microarray. All samples were analyzed in the Agilent platform except the SP cells and their counterpart (analyzed in the Affymetrix platform).
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| Overall design |
Three RNA sample replicates were prepared from each type of the NPC stem-like cells and their counterpart.
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| Contributor(s) |
Tan LP, Hoe SL, Fazlyn R, Ahmad SK, Chu TL, Nurul AS, Munirah A, Khoo AB |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| Submission date |
Feb 28, 2012 |
| Last update date |
Feb 04, 2023 |
| Contact name |
Lu Ping Tan |
| E-mail(s) |
luping@imr.gov.my
|
| Organization name |
Institute for Medical Research
|
| Department |
Molecular Pathology Unit
|
| Street address |
Jalan Pahang
|
| City |
Kuala Lumpur |
| ZIP/Postal code |
50588 |
| Country |
Malaysia |
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| Platforms (1) |
| GPL6244 |
[HuGene-1_0-st] Affymetrix Human Gene 1.0 ST Array [transcript (gene) version] |
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| Samples (6)
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| This SubSeries is part of SuperSeries: |
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| Relations |
| BioProject |
PRJNA155789 |
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