|
| Status |
Public on Dec 28, 2011 |
| Title |
Expression data in UPEC cystitis in female CBA mice |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by array
|
| Summary |
Data defines for the first time a whole bladder transcriptome of UPEC cystitis in female CBA mice using genome-wide expression profiling to map early host response pathways stemming from UPEC colonization
We used microarrays to detail the global programme of gene expression in UPEC UTI in mice
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| Overall design |
Whole mouse bladder collected at 2h following transurethral infection for RNA extraction and hybridization on Affymetrix microarrays. Non-pooled samples were used, with one array per mouse to expand power of expression profiles. Control mice received only PBS as a mock infection. Group sizes were five mice per group, and therefore five arrays were used per group.
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| |
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| Contributor(s) |
Duell BL, Carey AJ, Ulett GC |
| Citation(s) |
22184725 |
| Submission date |
Oct 25, 2011 |
| Last update date |
Mar 04, 2019 |
| Contact name |
Glen C Ulett |
| E-mail(s) |
g.ulett@griffith.edu.au
|
| Phone |
61756780765
|
| Organization name |
Griffith University
|
| Department |
School of Medical Science
|
| Street address |
Parklands Drive
|
| City |
Gold Coast |
| State/province |
QLD |
| ZIP/Postal code |
4222 |
| Country |
Australia |
| |
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| Platforms (1) |
| GPL6246 |
[MoGene-1_0-st] Affymetrix Mouse Gene 1.0 ST Array [transcript (gene) version] |
|
| Samples (10)
|
| GSM822232 |
UTI T2 [CBA mouse] biological rep4 |
| GSM822233 |
UTI T2 [CBA mouse] biological rep5 |
| GSM822234 |
Ctrl T2 [CBA mouse] biological rep1 |
| GSM822235 |
Ctrl T2 [CBA mouse] biological rep2 |
| GSM822236 |
Ctrl T2 [CBA mouse] biological rep3 |
| GSM822237 |
Ctrl T2 [CBA mouse] biological rep4 |
| GSM822238 |
Ctrl T2 [CBA mouse] biological rep5 |
|
| Relations |
| BioProject |
PRJNA149433 |
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