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Series GSE266219 Query DataSets for GSE266219
Status Public on May 07, 2024
Title Clinical and Immunological Responses to Combined JAK Inhibition and PD-1 immunotherapy for Lung Cancer Patients
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Persistent inflammation driven by cytokines like type-one interferon (IFN-I) can cause immunosuppression. We show that administration of the JAK1 inhibitor itacitinib after anti-PD1 immunotherapy improves immune function and anti-tumor responses in mice, and results in high response rates (67%) in a phase-2 clinical trial for metastatic non-small cell lung cancer. Patients who failed to respond to initial anti-PD1 immunotherapy but responded after addition of itacitinib had multiple features of poor immune function to anti-PD1 alone that improved after JAK inhibition. Itacitinib promoted CD8 T cell plasticity and therapeutic responses of exhausted- and effector-memory-like T cell clonotypes. Patients with persistent inflammation refractory to itacitinib showed progressive CD8 T cell terminal differentiation and progressive disease. Thus, JAK inhibition may improve the efficacy of anti-PD1 immunotherapy by pivoting T cell differentiation dynamics.
 
Overall design Live CD8+ cells or Live CD45+ cells were sorted from PBMCs of Patients with NSCLC treated with anti-PD1 and JAKi or anti-PD1 alone during select timeponts in treatment
 
Contributor(s) Mathew D, Minn A
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Apr 30, 2024
Last update date May 07, 2024
Contact name Divij Mathew
E-mail(s) Divij.Mathew@pennmedicine.upenn.edu
Organization name University of Pennsylvania
Street address 421 Curie Blvd
City Philadelphia
State/province PA
ZIP/Postal code 19104
Country USA
 
Platforms (1)
GPL24676 Illumina NovaSeq 6000 (Homo sapiens)
Samples (79)
GSM8242437 NR_1_13_LiveCD45PBMCs_GEX
GSM8242438 JAKiR_1_4_LiveCD45PBMCs_GEX
GSM8242439 aPD1R_1_6_LiveCD45PBMCs_GEX
Relations
BioProject PRJNA1106397

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE266219_Merged_p12_CD8_sorted_and_PBMC_extracted.rds.gz 293.7 Mb (ftp)(http) RDS
GSE266219_Merged_p13_CD8_sorted_and_PBMC_extracted.rds.gz 110.5 Mb (ftp)(http) RDS
GSE266219_Merged_p25_CD8_sorted_and_PBMC_extracted.rds.gz 87.3 Mb (ftp)(http) RDS
GSE266219_Merged_p27_CD8_sorted_and_PBMC_extracted.rds.gz 91.9 Mb (ftp)(http) RDS
GSE266219_Merged_p38_CD8_sorted_and_PBMC_extracted.rds.gz 91.4 Mb (ftp)(http) RDS
GSE266219_Merged_p3_CD8_sorted_and_PBMC_extracted.rds.gz 31.9 Mb (ftp)(http) RDS
GSE266219_Merged_p4_CD8_sorted_and_PBMC_extracted.rds.gz 155.3 Mb (ftp)(http) RDS
GSE266219_Merged_p69_CD8_sorted_and_PBMC_extracted.rds.gz 214.0 Mb (ftp)(http) RDS
GSE266219_Merged_p6_CD8_sorted_and_PBMC_extracted.rds.gz 83.7 Mb (ftp)(http) RDS
GSE266219_Merged_p7_CD8_sorted_and_PBMC_extracted.rds.gz 110.2 Mb (ftp)(http) RDS
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