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| Status |
Public on May 02, 2024 |
| Title |
Chromatin immunoprecipitation DNA-sequencing (ChIP-seq) for the histone modifications H3K27ac and H3K9me3 in liver tissues from MCD and regular chow diet mice |
| Organism |
Mus musculus |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
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| Summary |
Chromatin immunoprecipitation DNA-sequencing (ChIP-seq) for the histone modifications H3K27ac and H3K9me3 in liver tissues from Methionine- and choline-deficient diet (MCD) and regular chow diet mice.
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| Overall design |
Chromatin immunoprecipitation DNA-sequencing (ChIP-seq) for the histone modifications H3K27ac and H3K9me3 in liver tissues from MCD and regular chow diet mice.
MCD group: MCD-1, MCD-2, MCD-3. Regular chow diet group: NC-1, NC-2, NC-3.
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| Contributor(s) |
Zeng C, Li H, Wei M, Yu L, Mu Z, Huang Z, Ke Y, Wu M, Chen M, Li L, Xiao Y |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| Submission date |
Apr 28, 2024 |
| Last update date |
May 02, 2024 |
| Contact name |
Mingliang Wei Mingliang Wei |
| E-mail(s) |
2022202040135@whu.edu.cn
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| Phone |
15535363169
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| Organization name |
Wuhan University
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| Street address |
299 Bayi Road, Wuchang District
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| City |
Wuhan |
| State/province |
Hubei |
| ZIP/Postal code |
430070 |
| Country |
China |
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| Platforms (1) |
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| Samples (18)
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| GSM8240155 |
liver, MCD-2-H3K27ac |
| GSM8240156 |
liver, MCD-2-H3K9me3 |
| GSM8240157 |
liver, MCD-2-Input |
| GSM8240158 |
liver, MCD-3-H3K27ac |
| GSM8240159 |
liver, MCD-3-H3K9me3 |
| GSM8240160 |
liver, MCD-3-Input |
| GSM8240161 |
liver, NC-1-H3K27ac |
| GSM8240162 |
liver, NC-1-H3K9me3 |
| GSM8240163 |
liver, NC-1-Input |
| GSM8240164 |
liver, NC-2-H3K27ac |
| GSM8240165 |
liver, NC-2-H3K9me3 |
| GSM8240166 |
liver, NC-2-Input |
| GSM8240167 |
liver, NC-3-H3K27ac |
| GSM8240168 |
liver, NC-3-H3K9me3 |
| GSM8240169 |
liver, NC-3-Input |
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| Relations |
| BioProject |
PRJNA1105657 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE266077_RAW.tar |
1.9 Gb |
(http)(custom) |
TAR (of BW) |
SRA Run Selector |
| Raw data are available in SRA |
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